Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 TFAMP1-201ENST00000412727 736 ntBASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 UNC93B7-201ENST00000509439 705 ntBASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 PDPK2P-202ENST00000562415 1191 ntBASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 AC025181.2-201ENST00000606994 802 ntBASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TCRBV3S1A0A5B6 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 COL6A4P2-202ENST00000504443 2753 ntBASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 AL133267.1-201ENST00000398220 340 ntBASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 UPK3BP1-201ENST00000428678 509 ntBASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 FAM210CP-201ENST00000445714 574 ntBASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 AGGF1P1-201ENST00000509500 2073 ntBASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 FLJ16779-201ENST00000612722 7638 ntBASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TCRBV3S1A0A5B6 AC018665.1-201ENST00000622927 1362 ntBASIC14.34□□□□□ -0.11
TCRBV3S1A0A5B6 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms