Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 AC026120.1-201ENST00000611536 926 ntBASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 GRN-214ENST00000589265 1632 ntTSL 5 BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 AC113367.3-201ENST00000508316 1912 ntBASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 AP001267.2-201ENST00000532619 2086 ntBASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 AC138969.2-201ENST00000532739 9932 ntBASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
TRAV5A0A0B4J249 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 AC079781.5-202ENST00000641784 3743 ntBASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 C1R-201ENST00000535233 2211 ntTSL 2 BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 IL9RP2-201ENST00000423948 1312 ntBASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 AC023274.1-201ENST00000418278 595 ntBASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 HNRNPA1P28-201ENST00000424481 961 ntBASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 ADH5P3-201ENST00000433842 1137 ntBASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 TIMM8BP1-201ENST00000452384 211 ntBASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 AL928921.2-201ENST00000641325 2442 ntBASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TRAV5A0A0B4J249 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
TRAV5A0A0B4J249 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms