Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.96□□□□□ -0.02
PCDHGA11Q9Y5H2 CICP11-201ENST00000434745 2827 ntBASIC14.96□□□□□ -0.02
PCDHGA11Q9Y5H2 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
PCDHGA11Q9Y5H2 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
PCDHGA11Q9Y5H2 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
PCDHGA11Q9Y5H2 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
PCDHGA11Q9Y5H2 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 AC005912.2-201ENST00000619492 2400 ntBASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 TSSK5P-201ENST00000423978 907 ntBASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 AC055876.3-201ENST00000431496 288 ntBASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 AC009477.1-201ENST00000452936 217 ntBASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 AC092337.1-201ENST00000568699 1129 ntBASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 AC138649.4-201ENST00000612222 287 ntBASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 AC004461.2-201ENST00000629517 803 ntBASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.95□□□□□ -0.02
PCDHGA11Q9Y5H2 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 GHSR-202ENST00000427970 912 ntBASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 AC025181.2-201ENST00000606994 802 ntBASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms