Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 FO538757.1-201ENST00000623083 1397 ntBASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 HLA-V-204ENST00000476601 1289 ntBASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 AC125807.1-201ENST00000483097 614 ntBASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 AL138828.2-201ENST00000615812 383 ntBASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 AC093028.1-201ENST00000622998 982 ntBASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RHBDD3Q9Y3P4 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 KLF2P3-201ENST00000451977 1087 ntBASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 AC139530.3-201ENST00000620344 690 ntBASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.5□□□□□ -0.25
RHBDD3Q9Y3P4 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms