Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IFT52Q9Y366 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
IFT52Q9Y366 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.47□□□□□ -0.09
IFT52Q9Y366 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IFT52Q9Y366 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
IFT52Q9Y366 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
IFT52Q9Y366 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
IFT52Q9Y366 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.47□□□□□ -0.09
IFT52Q9Y366 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.47□□□□□ -0.09
IFT52Q9Y366 CNN2P11-201ENST00000429351 262 ntBASIC14.47□□□□□ -0.09
IFT52Q9Y366 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.47□□□□□ -0.09
IFT52Q9Y366 AP006288.1-201ENST00000446065 395 ntBASIC14.47□□□□□ -0.09
IFT52Q9Y366 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IFT52Q9Y366 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.47□□□□□ -0.09
IFT52Q9Y366 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
IFT52Q9Y366 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
IFT52Q9Y366 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
IFT52Q9Y366 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.47□□□□□ -0.09
IFT52Q9Y366 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.47□□□□□ -0.09
IFT52Q9Y366 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
IFT52Q9Y366 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IFT52Q9Y366 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.47□□□□□ -0.09
IFT52Q9Y366 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IFT52Q9Y366 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
IFT52Q9Y366 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IFT52Q9Y366 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
IFT52Q9Y366 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.47□□□□□ -0.09
IFT52Q9Y366 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
IFT52Q9Y366 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
IFT52Q9Y366 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.47□□□□□ -0.09
IFT52Q9Y366 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
IFT52Q9Y366 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
IFT52Q9Y366 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
IFT52Q9Y366 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
IFT52Q9Y366 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
IFT52Q9Y366 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.46□□□□□ -0.09
IFT52Q9Y366 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.46□□□□□ -0.09
IFT52Q9Y366 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
IFT52Q9Y366 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.46□□□□□ -0.09
IFT52Q9Y366 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
IFT52Q9Y366 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
IFT52Q9Y366 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
IFT52Q9Y366 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
IFT52Q9Y366 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
IFT52Q9Y366 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.46□□□□□ -0.09
IFT52Q9Y366 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
IFT52Q9Y366 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
IFT52Q9Y366 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.46□□□□□ -0.09
IFT52Q9Y366 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
IFT52Q9Y366 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
IFT52Q9Y366 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
IFT52Q9Y366 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
IFT52Q9Y366 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
IFT52Q9Y366 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.46□□□□□ -0.09
IFT52Q9Y366 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
IFT52Q9Y366 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
IFT52Q9Y366 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
IFT52Q9Y366 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
IFT52Q9Y366 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
IFT52Q9Y366 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.46□□□□□ -0.09
IFT52Q9Y366 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
IFT52Q9Y366 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.46□□□□□ -0.09
IFT52Q9Y366 AC069262.1-201ENST00000539058 672 ntBASIC14.46□□□□□ -0.09
IFT52Q9Y366 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.46□□□□□ -0.09
IFT52Q9Y366 AC092865.5-201ENST00000545435 363 ntBASIC14.46□□□□□ -0.09
IFT52Q9Y366 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
IFT52Q9Y366 SNHG9-202ENST00000564014 471 ntBASIC14.46□□□□□ -0.09
IFT52Q9Y366 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.46□□□□□ -0.09
IFT52Q9Y366 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.46□□□□□ -0.09
IFT52Q9Y366 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.46□□□□□ -0.09
IFT52Q9Y366 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.46□□□□□ -0.09
IFT52Q9Y366 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
IFT52Q9Y366 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.46□□□□□ -0.09
IFT52Q9Y366 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
IFT52Q9Y366 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
IFT52Q9Y366 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
IFT52Q9Y366 AC117489.1-201ENST00000625169 3217 ntBASIC14.46□□□□□ -0.09
IFT52Q9Y366 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
IFT52Q9Y366 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.46□□□□□ -0.1
IFT52Q9Y366 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
IFT52Q9Y366 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.46□□□□□ -0.1
IFT52Q9Y366 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.46□□□□□ -0.1
IFT52Q9Y366 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
IFT52Q9Y366 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
IFT52Q9Y366 WASH3P-207ENST00000560956 1394 ntBASIC14.46□□□□□ -0.1
IFT52Q9Y366 FO538757.1-201ENST00000623083 1397 ntBASIC14.46□□□□□ -0.1
IFT52Q9Y366 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
IFT52Q9Y366 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
IFT52Q9Y366 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
IFT52Q9Y366 FGD5P1-202ENST00000614866 2498 ntBASIC14.46□□□□□ -0.1
IFT52Q9Y366 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
IFT52Q9Y366 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
IFT52Q9Y366 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
IFT52Q9Y366 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.45□□□□□ -0.1
IFT52Q9Y366 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
IFT52Q9Y366 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
IFT52Q9Y366 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
IFT52Q9Y366 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
IFT52Q9Y366 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
IFT52Q9Y366 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 1327 ms