Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 CYP4F24P-201ENST00000586049 1580 ntBASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 GHSR-202ENST00000427970 912 ntBASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 HNRNPDP1-201ENST00000439535 754 ntBASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 AC073389.1-201ENST00000595595 795 ntBASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 SPTSSB-204ENST00000617024 1292 ntBASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 FOXO1B-201ENST00000504678 1527 ntBASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC12.62□□□□□ -0.39
RCL1Q9Y2P8 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 AL607033.1-201ENST00000623900 1599 ntBASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 AC005562.1-201ENST00000583030 3219 ntBASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 SLC4A1APP2-201ENST00000424054 1259 ntBASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 VN2R19P-201ENST00000442399 1052 ntBASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 AC018712.1-201ENST00000455767 687 ntBASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC12.61□□□□□ -0.39
RCL1Q9Y2P8 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms