Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 AC017083.2-201ENST00000608069 979 ntBASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 AC099568.2-201ENST00000609194 695 ntBASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 AC022532.1-201ENST00000624563 1728 ntBASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RPH3AQ9Y2J0 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 TMBIM7P-203ENST00000641617 1718 ntBASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 ELK1P1-201ENST00000485699 580 ntBASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 RRP7BP-205ENST00000566851 833 ntBASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 CTBP2P3-201ENST00000585629 1255 ntBASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 AL391069.4-201ENST00000609583 481 ntBASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 AP002414.2-201ENST00000591780 3365 ntBASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 AC087481.3-201ENST00000602886 1894 ntBASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RPH3AQ9Y2J0 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 SSR4P1-203ENST00000599569 2260 ntBASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.15□□□□□ -0.14
RPH3AQ9Y2J0 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms