Protein–RNA interactions for Protein: Q9UN81

L1RE1, LINE-1 retrotransposable element ORF1 protein, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
L1RE1Q9UN81 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 CTBP2P3-201ENST00000585629 1255 ntBASIC16.81■□□□□ 0.28
L1RE1Q9UN81 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.81■□□□□ 0.28
L1RE1Q9UN81 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 AC138969.3-201ENST00000546612 1459 ntBASIC16.8■□□□□ 0.28
L1RE1Q9UN81 AC138932.2-201ENST00000548268 1459 ntBASIC16.8■□□□□ 0.28
L1RE1Q9UN81 AC126755.4-201ENST00000549796 1459 ntBASIC16.8■□□□□ 0.28
L1RE1Q9UN81 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 RN7SL399P-201ENST00000471648 279 ntBASIC16.8■□□□□ 0.28
L1RE1Q9UN81 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 AC036164.1-201ENST00000570544 333 ntBASIC16.8■□□□□ 0.28
L1RE1Q9UN81 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 AL358472.5-202ENST00000641448 1267 ntBASIC16.8■□□□□ 0.28
L1RE1Q9UN81 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
L1RE1Q9UN81 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms