Protein–RNA interactions for Protein: Q9UJ99

CDH22, Cadherin-22, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH22Q9UJ99 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CDH22Q9UJ99 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH22Q9UJ99 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH22Q9UJ99 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CDH22Q9UJ99 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH22Q9UJ99 FXNP2-201ENST00000411625 547 ntBASIC16.26■□□□□ 0.19
CDH22Q9UJ99 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH22Q9UJ99 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.26■□□□□ 0.19
CDH22Q9UJ99 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC16.26■□□□□ 0.19
CDH22Q9UJ99 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.26■□□□□ 0.19
CDH22Q9UJ99 AC004898.1-201ENST00000451057 766 ntBASIC16.26■□□□□ 0.19
CDH22Q9UJ99 AC091804.1-201ENST00000486888 567 ntBASIC16.26■□□□□ 0.19
CDH22Q9UJ99 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH22Q9UJ99 GAPDHP40-201ENST00000505218 1006 ntBASIC16.26■□□□□ 0.19
CDH22Q9UJ99 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.26■□□□□ 0.19
CDH22Q9UJ99 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH22Q9UJ99 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH22Q9UJ99 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH22Q9UJ99 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH22Q9UJ99 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.26■□□□□ 0.19
CDH22Q9UJ99 U62317.3-201ENST00000608319 855 ntBASIC16.26■□□□□ 0.19
CDH22Q9UJ99 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH22Q9UJ99 LINC02228-204ENST00000642115 2962 ntBASIC16.26■□□□□ 0.19
CDH22Q9UJ99 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH22Q9UJ99 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH22Q9UJ99 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH22Q9UJ99 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
CDH22Q9UJ99 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CDH22Q9UJ99 AC099063.4-201ENST00000641099 1602 ntBASIC16.26■□□□□ 0.19
CDH22Q9UJ99 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH22Q9UJ99 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CDH22Q9UJ99 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH22Q9UJ99 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH22Q9UJ99 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH22Q9UJ99 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH22Q9UJ99 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH22Q9UJ99 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH22Q9UJ99 AC015818.8-201ENST00000587907 1519 ntBASIC16.25■□□□□ 0.19
CDH22Q9UJ99 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH22Q9UJ99 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CDH22Q9UJ99 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH22Q9UJ99 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH22Q9UJ99 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
CDH22Q9UJ99 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH22Q9UJ99 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.25■□□□□ 0.19
CDH22Q9UJ99 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH22Q9UJ99 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH22Q9UJ99 RNU1-114P-201ENST00000365297 166 ntBASIC16.25■□□□□ 0.19
CDH22Q9UJ99 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CDH22Q9UJ99 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CDH22Q9UJ99 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CDH22Q9UJ99 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.25■□□□□ 0.19
CDH22Q9UJ99 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH22Q9UJ99 KRT18P25-201ENST00000508931 1278 ntBASIC16.25■□□□□ 0.19
CDH22Q9UJ99 RNA5SP486-201ENST00000515961 83 ntBASIC16.25■□□□□ 0.19
CDH22Q9UJ99 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH22Q9UJ99 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH22Q9UJ99 AC020914.3-201ENST00000594712 304 ntBASIC16.25■□□□□ 0.19
CDH22Q9UJ99 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.25■□□□□ 0.19
CDH22Q9UJ99 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.25■□□□□ 0.19
CDH22Q9UJ99 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.25■□□□□ 0.19
CDH22Q9UJ99 AC006453.4-201ENST00000636949 1252 ntBASIC16.25■□□□□ 0.19
CDH22Q9UJ99 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH22Q9UJ99 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH22Q9UJ99 AC073347.1-201ENST00000421633 2643 ntBASIC16.25■□□□□ 0.19
CDH22Q9UJ99 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.25■□□□□ 0.19
CDH22Q9UJ99 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.25■□□□□ 0.19
CDH22Q9UJ99 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH22Q9UJ99 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH22Q9UJ99 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH22Q9UJ99 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH22Q9UJ99 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH22Q9UJ99 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH22Q9UJ99 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.24■□□□□ 0.19
CDH22Q9UJ99 AL138799.1-201ENST00000448213 1675 ntBASIC16.24■□□□□ 0.19
CDH22Q9UJ99 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH22Q9UJ99 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH22Q9UJ99 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH22Q9UJ99 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH22Q9UJ99 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.24■□□□□ 0.19
CDH22Q9UJ99 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH22Q9UJ99 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH22Q9UJ99 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH22Q9UJ99 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH22Q9UJ99 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH22Q9UJ99 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH22Q9UJ99 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH22Q9UJ99 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CDH22Q9UJ99 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CDH22Q9UJ99 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH22Q9UJ99 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH22Q9UJ99 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH22Q9UJ99 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.24■□□□□ 0.19
CDH22Q9UJ99 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH22Q9UJ99 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
CDH22Q9UJ99 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH22Q9UJ99 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CDH22Q9UJ99 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH22Q9UJ99 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.24■□□□□ 0.19
CDH22Q9UJ99 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms