Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP35Q9P2H5 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
USP35Q9P2H5 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC20.71■□□□□ 0.91
USP35Q9P2H5 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
USP35Q9P2H5 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
USP35Q9P2H5 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
USP35Q9P2H5 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC20.71■□□□□ 0.91
USP35Q9P2H5 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
USP35Q9P2H5 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
USP35Q9P2H5 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP35Q9P2H5 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
USP35Q9P2H5 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
USP35Q9P2H5 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP35Q9P2H5 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
USP35Q9P2H5 AL023775.1-201ENST00000454907 1746 ntBASIC20.7■□□□□ 0.9
USP35Q9P2H5 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP35Q9P2H5 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
USP35Q9P2H5 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP35Q9P2H5 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP35Q9P2H5 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP35Q9P2H5 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP35Q9P2H5 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
USP35Q9P2H5 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC20.7■□□□□ 0.9
USP35Q9P2H5 AC016700.1-201ENST00000429424 312 ntBASIC20.7■□□□□ 0.9
USP35Q9P2H5 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP35Q9P2H5 CNN2P10-201ENST00000443067 918 ntBASIC20.7■□□□□ 0.9
USP35Q9P2H5 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC20.7■□□□□ 0.9
USP35Q9P2H5 SPTLC1P5-201ENST00000450718 252 ntBASIC20.7■□□□□ 0.9
USP35Q9P2H5 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP35Q9P2H5 RN7SL720P-201ENST00000488178 304 ntBASIC20.7■□□□□ 0.9
USP35Q9P2H5 AC044849.1-201ENST00000519737 1188 ntBASIC20.7■□□□□ 0.9
USP35Q9P2H5 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC20.7■□□□□ 0.9
USP35Q9P2H5 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC20.7■□□□□ 0.9
USP35Q9P2H5 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC20.7■□□□□ 0.9
USP35Q9P2H5 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP35Q9P2H5 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
USP35Q9P2H5 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP35Q9P2H5 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
USP35Q9P2H5 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
USP35Q9P2H5 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP35Q9P2H5 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP35Q9P2H5 AL138799.1-201ENST00000448213 1675 ntBASIC20.7■□□□□ 0.9
USP35Q9P2H5 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP35Q9P2H5 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP35Q9P2H5 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC20.7■□□□□ 0.9
USP35Q9P2H5 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
USP35Q9P2H5 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
USP35Q9P2H5 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP35Q9P2H5 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP35Q9P2H5 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
USP35Q9P2H5 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP35Q9P2H5 AP001282.1-201ENST00000531301 1499 ntBASIC20.69■□□□□ 0.9
USP35Q9P2H5 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
USP35Q9P2H5 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP35Q9P2H5 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
USP35Q9P2H5 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP35Q9P2H5 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
USP35Q9P2H5 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC20.69■□□□□ 0.9
USP35Q9P2H5 TNRC18P2-201ENST00000417666 2714 ntBASIC20.69■□□□□ 0.9
USP35Q9P2H5 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
USP35Q9P2H5 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP35Q9P2H5 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
USP35Q9P2H5 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP35Q9P2H5 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP35Q9P2H5 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC20.69■□□□□ 0.9
USP35Q9P2H5 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC20.69■□□□□ 0.9
USP35Q9P2H5 AL133466.1-201ENST00000447582 150 ntBASIC20.69■□□□□ 0.9
USP35Q9P2H5 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC20.69■□□□□ 0.9
USP35Q9P2H5 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP35Q9P2H5 FADS2-212ENST00000522639 360 ntTSL 5 BASIC20.69■□□□□ 0.9
USP35Q9P2H5 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC20.69■□□□□ 0.9
USP35Q9P2H5 FADS2-215ENST00000574708 385 ntTSL 3 BASIC20.69■□□□□ 0.9
USP35Q9P2H5 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC20.69■□□□□ 0.9
USP35Q9P2H5 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC20.69■□□□□ 0.9
USP35Q9P2H5 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP35Q9P2H5 HLA-DQB2-231ENST00000435145 2026 ntBASIC20.69■□□□□ 0.9
USP35Q9P2H5 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC20.69■□□□□ 0.9
USP35Q9P2H5 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP35Q9P2H5 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
USP35Q9P2H5 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP35Q9P2H5 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC20.69■□□□□ 0.9
USP35Q9P2H5 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
USP35Q9P2H5 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
USP35Q9P2H5 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC20.69■□□□□ 0.9
USP35Q9P2H5 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP35Q9P2H5 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP35Q9P2H5 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC20.68■□□□□ 0.9
USP35Q9P2H5 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
USP35Q9P2H5 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC20.68■□□□□ 0.9
USP35Q9P2H5 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC20.68■□□□□ 0.9
USP35Q9P2H5 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC20.68■□□□□ 0.9
USP35Q9P2H5 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC20.68■□□□□ 0.9
USP35Q9P2H5 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC20.68■□□□□ 0.9
USP35Q9P2H5 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP35Q9P2H5 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP35Q9P2H5 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP35Q9P2H5 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP35Q9P2H5 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP35Q9P2H5 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC20.68■□□□□ 0.9
USP35Q9P2H5 TK1-203ENST00000588734 1681 ntTSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms