Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
LRFN1Q9P244 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
LRFN1Q9P244 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRFN1Q9P244 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRFN1Q9P244 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRFN1Q9P244 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRFN1Q9P244 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
LRFN1Q9P244 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRFN1Q9P244 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
LRFN1Q9P244 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRFN1Q9P244 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.11□□□□□ -0.15
LRFN1Q9P244 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRFN1Q9P244 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRFN1Q9P244 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRFN1Q9P244 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LRFN1Q9P244 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.11□□□□□ -0.15
LRFN1Q9P244 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.11□□□□□ -0.15
LRFN1Q9P244 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRFN1Q9P244 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.11□□□□□ -0.15
LRFN1Q9P244 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRFN1Q9P244 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.11□□□□□ -0.15
LRFN1Q9P244 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
LRFN1Q9P244 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRFN1Q9P244 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.11□□□□□ -0.15
LRFN1Q9P244 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRFN1Q9P244 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.11□□□□□ -0.15
LRFN1Q9P244 AC025279.2-201ENST00000569730 653 ntBASIC14.11□□□□□ -0.15
LRFN1Q9P244 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.11□□□□□ -0.15
LRFN1Q9P244 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
LRFN1Q9P244 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRFN1Q9P244 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRFN1Q9P244 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.11□□□□□ -0.15
LRFN1Q9P244 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRFN1Q9P244 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRFN1Q9P244 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.11□□□□□ -0.15
LRFN1Q9P244 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRFN1Q9P244 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRFN1Q9P244 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRFN1Q9P244 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.11□□□□□ -0.15
LRFN1Q9P244 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRFN1Q9P244 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.11□□□□□ -0.15
LRFN1Q9P244 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRFN1Q9P244 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.11□□□□□ -0.15
LRFN1Q9P244 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRFN1Q9P244 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.11□□□□□ -0.15
LRFN1Q9P244 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRFN1Q9P244 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.11□□□□□ -0.15
LRFN1Q9P244 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.11□□□□□ -0.15
LRFN1Q9P244 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRFN1Q9P244 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.11□□□□□ -0.15
LRFN1Q9P244 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.11□□□□□ -0.15
LRFN1Q9P244 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LRFN1Q9P244 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.1□□□□□ -0.15
LRFN1Q9P244 REXO1L6P-201ENST00000603433 1515 ntBASIC14.1□□□□□ -0.15
LRFN1Q9P244 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LRFN1Q9P244 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRFN1Q9P244 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRFN1Q9P244 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRFN1Q9P244 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.1□□□□□ -0.15
LRFN1Q9P244 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.1□□□□□ -0.15
LRFN1Q9P244 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRFN1Q9P244 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRFN1Q9P244 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LRFN1Q9P244 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
LRFN1Q9P244 AP005117.1-202ENST00000581724 1908 ntBASIC14.1□□□□□ -0.15
LRFN1Q9P244 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRFN1Q9P244 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LRFN1Q9P244 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRFN1Q9P244 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRFN1Q9P244 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRFN1Q9P244 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
LRFN1Q9P244 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.1□□□□□ -0.15
LRFN1Q9P244 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LRFN1Q9P244 KLF2P2-201ENST00000416807 1039 ntBASIC14.1□□□□□ -0.15
LRFN1Q9P244 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRFN1Q9P244 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRFN1Q9P244 YBX1P6-201ENST00000442962 1002 ntBASIC14.1□□□□□ -0.15
LRFN1Q9P244 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.1□□□□□ -0.15
LRFN1Q9P244 AC092658.1-201ENST00000505836 891 ntBASIC14.1□□□□□ -0.15
LRFN1Q9P244 RNA5SP412-201ENST00000516234 123 ntBASIC14.1□□□□□ -0.15
LRFN1Q9P244 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.1□□□□□ -0.15
LRFN1Q9P244 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.1□□□□□ -0.15
LRFN1Q9P244 AL583810.1-201ENST00000553344 1045 ntBASIC14.1□□□□□ -0.15
LRFN1Q9P244 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.1□□□□□ -0.15
LRFN1Q9P244 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.1□□□□□ -0.15
LRFN1Q9P244 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.1□□□□□ -0.15
LRFN1Q9P244 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LRFN1Q9P244 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.1□□□□□ -0.15
LRFN1Q9P244 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
LRFN1Q9P244 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LRFN1Q9P244 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRFN1Q9P244 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.1□□□□□ -0.15
LRFN1Q9P244 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LRFN1Q9P244 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRFN1Q9P244 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRFN1Q9P244 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.1□□□□□ -0.15
LRFN1Q9P244 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRFN1Q9P244 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRFN1Q9P244 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRFN1Q9P244 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms