Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCM2LQ9NUG4 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 CICP11-201ENST00000434745 2827 ntBASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 TFAMP1-201ENST00000412727 736 ntBASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 AC007274.1-201ENST00000439805 662 ntBASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 GAPDHP21-201ENST00000450301 1010 ntBASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 AC098859.1-201ENST00000502915 1238 ntBASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 AC097359.3-201ENST00000603982 1210 ntBASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 AC092135.3-201ENST00000624151 1846 ntBASIC14.69□□□□□ -0.06
CCM2LQ9NUG4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 AC002056.1-201ENST00000395613 760 ntBASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 AL008721.1-201ENST00000609964 604 ntBASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 AC005252.3-201ENST00000623855 2258 ntBASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCM2LQ9NUG4 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
CCM2LQ9NUG4 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms