Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HMG20AQ9NP66 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC14.05□□□□□ -0.16
HMG20AQ9NP66 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMG20AQ9NP66 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMG20AQ9NP66 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
HMG20AQ9NP66 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMG20AQ9NP66 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMG20AQ9NP66 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.05□□□□□ -0.16
HMG20AQ9NP66 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.05□□□□□ -0.16
HMG20AQ9NP66 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
HMG20AQ9NP66 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.05□□□□□ -0.16
HMG20AQ9NP66 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HMG20AQ9NP66 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HMG20AQ9NP66 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.05□□□□□ -0.16
HMG20AQ9NP66 PRSS29P-201ENST00000440800 595 ntBASIC14.05□□□□□ -0.16
HMG20AQ9NP66 AC092910.1-201ENST00000482027 1129 ntBASIC14.05□□□□□ -0.16
HMG20AQ9NP66 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.05□□□□□ -0.16
HMG20AQ9NP66 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.05□□□□□ -0.16
HMG20AQ9NP66 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.05□□□□□ -0.16
HMG20AQ9NP66 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
HMG20AQ9NP66 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.05□□□□□ -0.16
HMG20AQ9NP66 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
HMG20AQ9NP66 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.05□□□□□ -0.16
HMG20AQ9NP66 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.05□□□□□ -0.16
HMG20AQ9NP66 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMG20AQ9NP66 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HMG20AQ9NP66 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMG20AQ9NP66 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.05□□□□□ -0.16
HMG20AQ9NP66 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMG20AQ9NP66 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMG20AQ9NP66 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HMG20AQ9NP66 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
HMG20AQ9NP66 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMG20AQ9NP66 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.05□□□□□ -0.16
HMG20AQ9NP66 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.05□□□□□ -0.16
HMG20AQ9NP66 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
HMG20AQ9NP66 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 AL031284.1-201ENST00000419297 478 ntBASIC14.04□□□□□ -0.16
HMG20AQ9NP66 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 AP002469.2-201ENST00000531724 424 ntBASIC14.04□□□□□ -0.16
HMG20AQ9NP66 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 AL160237.2-201ENST00000556165 472 ntBASIC14.04□□□□□ -0.16
HMG20AQ9NP66 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 MIR4515-201ENST00000584082 81 ntBASIC14.04□□□□□ -0.16
HMG20AQ9NP66 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 AC104692.2-201ENST00000603054 253 ntBASIC14.04□□□□□ -0.16
HMG20AQ9NP66 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 ACTL9-202ENST00000612068 1252 ntBASIC14.04□□□□□ -0.16
HMG20AQ9NP66 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 WASH3P-207ENST00000560956 1394 ntBASIC14.04□□□□□ -0.16
HMG20AQ9NP66 FO538757.1-201ENST00000623083 1397 ntBASIC14.04□□□□□ -0.16
HMG20AQ9NP66 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 AL023775.1-201ENST00000454907 1746 ntBASIC14.04□□□□□ -0.16
HMG20AQ9NP66 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMG20AQ9NP66 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 AC015909.5-201ENST00000624336 2266 ntBASIC14.03□□□□□ -0.16
HMG20AQ9NP66 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 MTHFR-210ENST00000641407 2387 ntBASIC14.03□□□□□ -0.16
HMG20AQ9NP66 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.03□□□□□ -0.16
HMG20AQ9NP66 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms