Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.13■□□□□ 0.33
CCSER1Q9C0I3 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.13■□□□□ 0.33
CCSER1Q9C0I3 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.13■□□□□ 0.33
CCSER1Q9C0I3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.13■□□□□ 0.33
CCSER1Q9C0I3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCSER1Q9C0I3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCSER1Q9C0I3 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCSER1Q9C0I3 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCSER1Q9C0I3 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCSER1Q9C0I3 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.13■□□□□ 0.33
CCSER1Q9C0I3 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCSER1Q9C0I3 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCSER1Q9C0I3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCSER1Q9C0I3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.13■□□□□ 0.33
CCSER1Q9C0I3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.13■□□□□ 0.33
CCSER1Q9C0I3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCSER1Q9C0I3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 AL035633.1-201ENST00000406139 838 ntBASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 SOCS2P1-201ENST00000417727 557 ntBASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 DUX4L47-201ENST00000566374 394 ntBASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 AC133539.2-201ENST00000604757 467 ntBASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 KRT8P14-201ENST00000414254 1442 ntBASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCSER1Q9C0I3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCSER1Q9C0I3 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCSER1Q9C0I3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCSER1Q9C0I3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.11■□□□□ 0.33
CCSER1Q9C0I3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCSER1Q9C0I3 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CCSER1Q9C0I3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCSER1Q9C0I3 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.11■□□□□ 0.33
CCSER1Q9C0I3 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.11■□□□□ 0.33
CCSER1Q9C0I3 AC018442.1-201ENST00000421439 2061 ntBASIC17.11■□□□□ 0.33
CCSER1Q9C0I3 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCSER1Q9C0I3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCSER1Q9C0I3 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.11■□□□□ 0.33
CCSER1Q9C0I3 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCSER1Q9C0I3 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.11■□□□□ 0.33
CCSER1Q9C0I3 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCSER1Q9C0I3 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms