Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 AP002803.1-201ENST00000528836 498 ntBASIC18.95■□□□□ 0.62
CNTNAP4Q9C0A0 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC18.95■□□□□ 0.62
CNTNAP4Q9C0A0 TPM1-223ENST00000560445 485 ntTSL 3 BASIC18.95■□□□□ 0.62
CNTNAP4Q9C0A0 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC18.95■□□□□ 0.62
CNTNAP4Q9C0A0 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC18.95■□□□□ 0.62
CNTNAP4Q9C0A0 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC18.95■□□□□ 0.62
CNTNAP4Q9C0A0 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNTNAP4Q9C0A0 FRMPD2B-201ENST00000431305 1347 ntBASIC18.95■□□□□ 0.62
CNTNAP4Q9C0A0 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNTNAP4Q9C0A0 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CNTNAP4Q9C0A0 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNTNAP4Q9C0A0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNTNAP4Q9C0A0 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CNTNAP4Q9C0A0 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CNTNAP4Q9C0A0 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.94■□□□□ 0.62
CNTNAP4Q9C0A0 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNTNAP4Q9C0A0 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNTNAP4Q9C0A0 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.94■□□□□ 0.62
CNTNAP4Q9C0A0 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNTNAP4Q9C0A0 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC18.94■□□□□ 0.62
CNTNAP4Q9C0A0 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC18.94■□□□□ 0.62
CNTNAP4Q9C0A0 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC18.94■□□□□ 0.62
CNTNAP4Q9C0A0 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CNTNAP4Q9C0A0 RPL13AP19-201ENST00000434320 584 ntBASIC18.94■□□□□ 0.62
CNTNAP4Q9C0A0 AC026320.2-201ENST00000434379 478 ntBASIC18.94■□□□□ 0.62
CNTNAP4Q9C0A0 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC18.94■□□□□ 0.62
CNTNAP4Q9C0A0 CTBP2P4-201ENST00000513884 920 ntBASIC18.94■□□□□ 0.62
CNTNAP4Q9C0A0 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC18.94■□□□□ 0.62
CNTNAP4Q9C0A0 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC18.94■□□□□ 0.62
CNTNAP4Q9C0A0 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC18.94■□□□□ 0.62
CNTNAP4Q9C0A0 PHBP15-201ENST00000574228 665 ntBASIC18.94■□□□□ 0.62
CNTNAP4Q9C0A0 AC005632.3-201ENST00000605544 308 ntBASIC18.94■□□□□ 0.62
CNTNAP4Q9C0A0 AC007881.3-201ENST00000608897 607 ntBASIC18.94■□□□□ 0.62
CNTNAP4Q9C0A0 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC18.94■□□□□ 0.62
CNTNAP4Q9C0A0 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNTNAP4Q9C0A0 CYP4F23P-201ENST00000593402 1579 ntBASIC18.94■□□□□ 0.62
CNTNAP4Q9C0A0 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNTNAP4Q9C0A0 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNTNAP4Q9C0A0 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC18.94■□□□□ 0.62
CNTNAP4Q9C0A0 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.94■□□□□ 0.62
CNTNAP4Q9C0A0 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.93■□□□□ 0.62
CNTNAP4Q9C0A0 AC144522.1-201ENST00000625111 1658 ntBASIC18.93■□□□□ 0.62
CNTNAP4Q9C0A0 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CNTNAP4Q9C0A0 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.93■□□□□ 0.62
CNTNAP4Q9C0A0 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.93■□□□□ 0.62
CNTNAP4Q9C0A0 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC18.93■□□□□ 0.62
CNTNAP4Q9C0A0 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNTNAP4Q9C0A0 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNTNAP4Q9C0A0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNTNAP4Q9C0A0 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNTNAP4Q9C0A0 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNTNAP4Q9C0A0 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CNTNAP4Q9C0A0 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.93■□□□□ 0.62
CNTNAP4Q9C0A0 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNTNAP4Q9C0A0 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC18.93■□□□□ 0.62
CNTNAP4Q9C0A0 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNTNAP4Q9C0A0 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNTNAP4Q9C0A0 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNTNAP4Q9C0A0 HPGD-203ENST00000422112 805 ntTSL 2 BASIC18.93■□□□□ 0.62
CNTNAP4Q9C0A0 RPL7P35-201ENST00000446943 740 ntBASIC18.93■□□□□ 0.62
CNTNAP4Q9C0A0 NDUFS6P1-201ENST00000485187 316 ntBASIC18.93■□□□□ 0.62
CNTNAP4Q9C0A0 AC008723.1-201ENST00000506922 207 ntBASIC18.93■□□□□ 0.62
CNTNAP4Q9C0A0 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC18.93■□□□□ 0.62
CNTNAP4Q9C0A0 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CNTNAP4Q9C0A0 NAT9-220ENST00000582870 896 ntTSL 5 BASIC18.93■□□□□ 0.62
CNTNAP4Q9C0A0 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
CNTNAP4Q9C0A0 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC18.93■□□□□ 0.62
CNTNAP4Q9C0A0 AC027601.3-201ENST00000622907 509 ntBASIC18.93■□□□□ 0.62
CNTNAP4Q9C0A0 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNTNAP4Q9C0A0 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CNTNAP4Q9C0A0 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNTNAP4Q9C0A0 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNTNAP4Q9C0A0 STK26-204ENST00000481105 1835 ntTSL 2 BASIC18.92■□□□□ 0.62
CNTNAP4Q9C0A0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CNTNAP4Q9C0A0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNTNAP4Q9C0A0 AL359258.3-201ENST00000622910 2331 ntBASIC18.92■□□□□ 0.62
CNTNAP4Q9C0A0 PCDH8P1-201ENST00000428983 2773 ntBASIC18.92■□□□□ 0.62
CNTNAP4Q9C0A0 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNTNAP4Q9C0A0 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.92■□□□□ 0.62
CNTNAP4Q9C0A0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNTNAP4Q9C0A0 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.92■□□□□ 0.62
CNTNAP4Q9C0A0 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.92■□□□□ 0.62
CNTNAP4Q9C0A0 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CNTNAP4Q9C0A0 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CNTNAP4Q9C0A0 AP000356.3-201ENST00000382243 753 ntBASIC18.92■□□□□ 0.62
CNTNAP4Q9C0A0 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CNTNAP4Q9C0A0 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC18.92■□□□□ 0.62
CNTNAP4Q9C0A0 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC18.92■□□□□ 0.62
CNTNAP4Q9C0A0 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC18.92■□□□□ 0.62
CNTNAP4Q9C0A0 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC18.92■□□□□ 0.62
CNTNAP4Q9C0A0 MIR4649-201ENST00000582839 64 ntBASIC18.92■□□□□ 0.62
CNTNAP4Q9C0A0 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC18.92■□□□□ 0.62
CNTNAP4Q9C0A0 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC18.92■□□□□ 0.62
CNTNAP4Q9C0A0 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC18.92■□□□□ 0.62
CNTNAP4Q9C0A0 MIR6769A-201ENST00000617340 73 ntBASIC18.92■□□□□ 0.62
CNTNAP4Q9C0A0 AC133540.1-201ENST00000620845 1019 ntBASIC18.92■□□□□ 0.62
CNTNAP4Q9C0A0 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC18.92■□□□□ 0.62
CNTNAP4Q9C0A0 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.92■□□□□ 0.62
CNTNAP4Q9C0A0 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CNTNAP4Q9C0A0 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms