Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 MKNK2P1-201ENST00000437526 628 ntBASIC12□□□□□ -0.49
NDUFAF3Q9BU61 URGCP-206ENST00000446958 365 ntTSL 2 BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 CIPC-205ENST00000555437 566 ntTSL 3 BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 MIR3909-201ENST00000579518 119 ntBASIC12□□□□□ -0.49
NDUFAF3Q9BU61 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 AP001160.2-201ENST00000596071 487 ntBASIC12□□□□□ -0.49
NDUFAF3Q9BU61 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 AC004877.2-201ENST00000623941 599 ntBASIC12□□□□□ -0.49
NDUFAF3Q9BU61 AC010507.1-201ENST00000633895 436 ntBASIC12□□□□□ -0.49
NDUFAF3Q9BU61 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 TRIM80P-201ENST00000455685 2848 ntBASIC12□□□□□ -0.49
NDUFAF3Q9BU61 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NDUFAF3Q9BU61 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 DDT-204ENST00000404092 805 ntTSL 3 BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 CXCL1P1-201ENST00000502804 216 ntBASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 PDPK2P-202ENST00000562415 1191 ntBASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 RPS15-207ENST00000591032 550 ntTSL 3 BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 RPS15-212ENST00000593052 629 ntTSL 2 BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 CYP2A7P1-201ENST00000595391 815 ntBASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 AC008677.1-201ENST00000519230 1561 ntBASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 SNX33P1-201ENST00000592116 1762 ntBASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC11.99□□□□□ -0.49
NDUFAF3Q9BU61 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms