Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
UPK3BQ9BT76 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UPK3BQ9BT76 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UPK3BQ9BT76 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
UPK3BQ9BT76 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UPK3BQ9BT76 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UPK3BQ9BT76 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UPK3BQ9BT76 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
UPK3BQ9BT76 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
UPK3BQ9BT76 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
UPK3BQ9BT76 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC10.78□□□□□ -0.68
UPK3BQ9BT76 GRK6P1-201ENST00000400595 1711 ntBASIC10.78□□□□□ -0.68
UPK3BQ9BT76 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC10.78□□□□□ -0.68
UPK3BQ9BT76 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC10.78□□□□□ -0.68
UPK3BQ9BT76 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
UPK3BQ9BT76 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC10.78□□□□□ -0.68
UPK3BQ9BT76 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
UPK3BQ9BT76 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
UPK3BQ9BT76 RERG-209ENST00000546331 1383 ntTSL 2 BASIC10.77□□□□□ -0.68
UPK3BQ9BT76 AL607033.1-201ENST00000623900 1599 ntBASIC10.77□□□□□ -0.68
UPK3BQ9BT76 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
UPK3BQ9BT76 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
UPK3BQ9BT76 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC10.77□□□□□ -0.68
UPK3BQ9BT76 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.68
UPK3BQ9BT76 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
UPK3BQ9BT76 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
UPK3BQ9BT76 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
UPK3BQ9BT76 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
UPK3BQ9BT76 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
UPK3BQ9BT76 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC10.77□□□□□ -0.68
UPK3BQ9BT76 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
UPK3BQ9BT76 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.68
UPK3BQ9BT76 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC10.77□□□□□ -0.68
UPK3BQ9BT76 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC10.77□□□□□ -0.68
UPK3BQ9BT76 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC10.77□□□□□ -0.68
UPK3BQ9BT76 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC10.77□□□□□ -0.68
UPK3BQ9BT76 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 AL133267.1-201ENST00000398220 340 ntBASIC10.77□□□□□ -0.69
UPK3BQ9BT76 DGCR5-201ENST00000399539 862 ntBASIC10.77□□□□□ -0.69
UPK3BQ9BT76 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 RN7SL752P-201ENST00000463779 287 ntBASIC10.77□□□□□ -0.69
UPK3BQ9BT76 ELK1P1-201ENST00000485699 580 ntBASIC10.77□□□□□ -0.69
UPK3BQ9BT76 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 AC000095.1-201ENST00000603208 874 ntBASIC10.77□□□□□ -0.69
UPK3BQ9BT76 SRP9-204ENST00000619790 377 ntTSL 2 BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 ADAMTS7P1-201ENST00000613213 4793 ntBASIC10.77□□□□□ -0.69
UPK3BQ9BT76 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
UPK3BQ9BT76 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC10.76□□□□□ -0.69
UPK3BQ9BT76 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
UPK3BQ9BT76 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
UPK3BQ9BT76 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC10.76□□□□□ -0.69
UPK3BQ9BT76 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC10.76□□□□□ -0.69
UPK3BQ9BT76 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC10.76□□□□□ -0.69
UPK3BQ9BT76 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
UPK3BQ9BT76 FLII-221ENST00000578558 2377 ntTSL 5 BASIC10.76□□□□□ -0.69
UPK3BQ9BT76 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
UPK3BQ9BT76 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UPK3BQ9BT76 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
UPK3BQ9BT76 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
UPK3BQ9BT76 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
UPK3BQ9BT76 CLK3P2-201ENST00000427566 1453 ntBASIC10.76□□□□□ -0.69
UPK3BQ9BT76 CYP2AB1P-202ENST00000454440 1456 ntBASIC10.76□□□□□ -0.69
UPK3BQ9BT76 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
UPK3BQ9BT76 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC10.76□□□□□ -0.69
UPK3BQ9BT76 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC10.76□□□□□ -0.69
UPK3BQ9BT76 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms