Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTPN18Q99952 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTPN18Q99952 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC17.27■□□□□ 0.35
PTPN18Q99952 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN18Q99952 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PTPN18Q99952 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN18Q99952 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PTPN18Q99952 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN18Q99952 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.26■□□□□ 0.35
PTPN18Q99952 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN18Q99952 AL138725.1-201ENST00000407347 1314 ntBASIC17.26■□□□□ 0.35
PTPN18Q99952 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN18Q99952 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN18Q99952 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PTPN18Q99952 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.26■□□□□ 0.35
PTPN18Q99952 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PTPN18Q99952 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN18Q99952 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN18Q99952 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.26■□□□□ 0.35
PTPN18Q99952 PCDHA12-202ENST00000613593 2588 ntBASIC17.26■□□□□ 0.35
PTPN18Q99952 RPL5P21-201ENST00000404620 815 ntBASIC17.26■□□□□ 0.35
PTPN18Q99952 AL592076.1-201ENST00000424448 303 ntBASIC17.26■□□□□ 0.35
PTPN18Q99952 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC17.26■□□□□ 0.35
PTPN18Q99952 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
PTPN18Q99952 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPN18Q99952 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPN18Q99952 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPN18Q99952 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
PTPN18Q99952 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPN18Q99952 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC17.26■□□□□ 0.35
PTPN18Q99952 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PTPN18Q99952 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC17.26■□□□□ 0.35
PTPN18Q99952 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC17.26■□□□□ 0.35
PTPN18Q99952 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPN18Q99952 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.26■□□□□ 0.35
PTPN18Q99952 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN18Q99952 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PTPN18Q99952 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PTPN18Q99952 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN18Q99952 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN18Q99952 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN18Q99952 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN18Q99952 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPN18Q99952 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPN18Q99952 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN18Q99952 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.25■□□□□ 0.35
PTPN18Q99952 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN18Q99952 AC015909.3-201ENST00000572855 1794 ntBASIC17.25■□□□□ 0.35
PTPN18Q99952 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN18Q99952 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.25■□□□□ 0.35
PTPN18Q99952 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN18Q99952 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN18Q99952 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.25■□□□□ 0.35
PTPN18Q99952 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PTPN18Q99952 AL359258.3-201ENST00000622910 2331 ntBASIC17.25■□□□□ 0.35
PTPN18Q99952 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN18Q99952 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.25■□□□□ 0.35
PTPN18Q99952 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN18Q99952 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN18Q99952 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN18Q99952 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN18Q99952 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC17.25■□□□□ 0.35
PTPN18Q99952 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC17.25■□□□□ 0.35
PTPN18Q99952 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC17.25■□□□□ 0.35
PTPN18Q99952 PPOX-204ENST00000462866 473 ntTSL 5 BASIC17.25■□□□□ 0.35
PTPN18Q99952 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC17.25■□□□□ 0.35
PTPN18Q99952 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC17.25■□□□□ 0.35
PTPN18Q99952 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN18Q99952 TPM1-223ENST00000560445 485 ntTSL 3 BASIC17.25■□□□□ 0.35
PTPN18Q99952 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC17.25■□□□□ 0.35
PTPN18Q99952 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC17.25■□□□□ 0.35
PTPN18Q99952 AL132780.4-201ENST00000624870 1135 ntBASIC17.25■□□□□ 0.35
PTPN18Q99952 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN18Q99952 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN18Q99952 STK26-204ENST00000481105 1835 ntTSL 2 BASIC17.25■□□□□ 0.35
PTPN18Q99952 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.25■□□□□ 0.35
PTPN18Q99952 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PTPN18Q99952 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN18Q99952 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN18Q99952 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN18Q99952 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN18Q99952 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PTPN18Q99952 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.25■□□□□ 0.35
PTPN18Q99952 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
PTPN18Q99952 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.25■□□□□ 0.35
PTPN18Q99952 RAN-210ENST00000541630 1475 ntTSL 2 BASIC17.24■□□□□ 0.35
PTPN18Q99952 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.24■□□□□ 0.35
PTPN18Q99952 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PTPN18Q99952 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.24■□□□□ 0.35
PTPN18Q99952 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN18Q99952 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN18Q99952 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.24■□□□□ 0.35
PTPN18Q99952 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PTPN18Q99952 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.24■□□□□ 0.35
PTPN18Q99952 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN18Q99952 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PTPN18Q99952 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.24■□□□□ 0.35
PTPN18Q99952 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
PTPN18Q99952 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PTPN18Q99952 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms