Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 LINC02084-201ENST00000606069 1096 ntBASIC12.75□□□□□ -0.37
GAFA1Q96PS6 SRP9-204ENST00000619790 377 ntTSL 2 BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 RPSAP52-203ENST00000622976 1023 ntBASIC12.75□□□□□ -0.37
GAFA1Q96PS6 AC006058.4-201ENST00000624016 1670 ntBASIC12.75□□□□□ -0.37
GAFA1Q96PS6 PRSS30P-206ENST00000641773 873 ntBASIC12.75□□□□□ -0.37
GAFA1Q96PS6 AC105233.6-201ENST00000642093 218 ntBASIC12.75□□□□□ -0.37
GAFA1Q96PS6 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
GAFA1Q96PS6 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 AL157414.3-201ENST00000624276 1954 ntBASIC12.74□□□□□ -0.37
GAFA1Q96PS6 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 RN7SL837P-201ENST00000463010 287 ntBASIC12.74□□□□□ -0.37
GAFA1Q96PS6 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 AC010319.3-201ENST00000597028 470 ntBASIC12.74□□□□□ -0.37
GAFA1Q96PS6 CECR7-204ENST00000609932 568 ntTSL 2 BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 REXO1L5P-201ENST00000622260 2098 ntBASIC12.74□□□□□ -0.37
GAFA1Q96PS6 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC12.74□□□□□ -0.37
GAFA1Q96PS6 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GAFA1Q96PS6 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
GAFA1Q96PS6 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
GAFA1Q96PS6 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.73□□□□□ -0.37
GAFA1Q96PS6 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
GAFA1Q96PS6 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GAFA1Q96PS6 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC12.73□□□□□ -0.37
GAFA1Q96PS6 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
GAFA1Q96PS6 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
GAFA1Q96PS6 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GAFA1Q96PS6 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.73□□□□□ -0.37
GAFA1Q96PS6 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GAFA1Q96PS6 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC12.73□□□□□ -0.37
GAFA1Q96PS6 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
GAFA1Q96PS6 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GAFA1Q96PS6 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GAFA1Q96PS6 LINC00528-201ENST00000600723 2160 ntBASIC12.73□□□□□ -0.37
GAFA1Q96PS6 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC12.73□□□□□ -0.37
GAFA1Q96PS6 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.73□□□□□ -0.37
GAFA1Q96PS6 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms