Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 SAPCD2P3-201ENST00000455031 850 ntBASIC11.71□□□□□ -0.53
AP1S3Q96PC3 KRT18P31-201ENST00000506277 1292 ntBASIC11.71□□□□□ -0.53
AP1S3Q96PC3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 OR7E14P-202ENST00000530490 1290 ntBASIC11.71□□□□□ -0.53
AP1S3Q96PC3 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 MIR3652-201ENST00000579335 131 ntBASIC11.71□□□□□ -0.53
AP1S3Q96PC3 CYB561-216ENST00000582297 897 ntTSL 3 BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 CYGB-205ENST00000590175 830 ntTSL 3 BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 REXO1L6P-202ENST00000619970 1078 ntBASIC11.71□□□□□ -0.53
AP1S3Q96PC3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 AL645728.2-201ENST00000641974 660 ntBASIC11.71□□□□□ -0.53
AP1S3Q96PC3 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 RNF150-206ENST00000515673 9805 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
AP1S3Q96PC3 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
AP1S3Q96PC3 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
AP1S3Q96PC3 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
AP1S3Q96PC3 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
AP1S3Q96PC3 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC11.71□□□□□ -0.54
AP1S3Q96PC3 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.54
AP1S3Q96PC3 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
AP1S3Q96PC3 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
AP1S3Q96PC3 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
AP1S3Q96PC3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
AP1S3Q96PC3 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
AP1S3Q96PC3 CACNA1F-201ENST00000323022 6037 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
AP1S3Q96PC3 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
AP1S3Q96PC3 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
AP1S3Q96PC3 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC11.71□□□□□ -0.54
AP1S3Q96PC3 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
AP1S3Q96PC3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC11.71□□□□□ -0.54
AP1S3Q96PC3 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
AP1S3Q96PC3 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
AP1S3Q96PC3 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
AP1S3Q96PC3 AMBRA1-212ENST00000534300 5067 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 COL6A4P2-202ENST00000504443 2753 ntBASIC11.7□□□□□ -0.54
AP1S3Q96PC3 SLC7A1-201ENST00000380752 7347 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 CICP23-201ENST00000605013 2741 ntBASIC11.7□□□□□ -0.54
AP1S3Q96PC3 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 KRT18P34-201ENST00000488218 1270 ntBASIC11.7□□□□□ -0.54
AP1S3Q96PC3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 AC073648.2-201ENST00000510116 352 ntBASIC11.7□□□□□ -0.54
AP1S3Q96PC3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 AC005593.1-201ENST00000624894 515 ntBASIC11.7□□□□□ -0.54
AP1S3Q96PC3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 DOCK3-201ENST00000266037 8755 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
AP1S3Q96PC3 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms