Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL21A1Q96P44 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.08
COL21A1Q96P44 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.58□□□□□ -0.08
COL21A1Q96P44 AC007326.2-201ENST00000624224 7579 ntBASIC14.58□□□□□ -0.08
COL21A1Q96P44 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
COL21A1Q96P44 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL21A1Q96P44 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL21A1Q96P44 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
COL21A1Q96P44 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL21A1Q96P44 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.58□□□□□ -0.08
COL21A1Q96P44 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.58□□□□□ -0.08
COL21A1Q96P44 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.58□□□□□ -0.08
COL21A1Q96P44 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.58□□□□□ -0.08
COL21A1Q96P44 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
COL21A1Q96P44 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL21A1Q96P44 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.58□□□□□ -0.08
COL21A1Q96P44 AC009407.1-201ENST00000568958 598 ntBASIC14.58□□□□□ -0.08
COL21A1Q96P44 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.58□□□□□ -0.08
COL21A1Q96P44 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.58□□□□□ -0.08
COL21A1Q96P44 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.58□□□□□ -0.08
COL21A1Q96P44 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
COL21A1Q96P44 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.58□□□□□ -0.08
COL21A1Q96P44 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL21A1Q96P44 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL21A1Q96P44 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.58□□□□□ -0.08
COL21A1Q96P44 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.58□□□□□ -0.08
COL21A1Q96P44 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
COL21A1Q96P44 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL21A1Q96P44 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL21A1Q96P44 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
COL21A1Q96P44 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL21A1Q96P44 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL21A1Q96P44 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.58□□□□□ -0.08
COL21A1Q96P44 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.58□□□□□ -0.08
COL21A1Q96P44 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
COL21A1Q96P44 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL21A1Q96P44 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL21A1Q96P44 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL21A1Q96P44 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
COL21A1Q96P44 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL21A1Q96P44 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL21A1Q96P44 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
COL21A1Q96P44 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
COL21A1Q96P44 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
COL21A1Q96P44 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL21A1Q96P44 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
COL21A1Q96P44 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL21A1Q96P44 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL21A1Q96P44 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.57□□□□□ -0.08
COL21A1Q96P44 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
COL21A1Q96P44 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
COL21A1Q96P44 MROH4P-201ENST00000431302 1578 ntBASIC14.57□□□□□ -0.08
COL21A1Q96P44 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.57□□□□□ -0.08
COL21A1Q96P44 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL21A1Q96P44 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL21A1Q96P44 SBF1P1-201ENST00000444527 5631 ntBASIC14.57□□□□□ -0.08
COL21A1Q96P44 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.57□□□□□ -0.08
COL21A1Q96P44 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
COL21A1Q96P44 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL21A1Q96P44 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL21A1Q96P44 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL21A1Q96P44 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.57□□□□□ -0.08
COL21A1Q96P44 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.57□□□□□ -0.08
COL21A1Q96P44 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
COL21A1Q96P44 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.57□□□□□ -0.08
COL21A1Q96P44 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.57□□□□□ -0.08
COL21A1Q96P44 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.57□□□□□ -0.08
COL21A1Q96P44 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
COL21A1Q96P44 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.57□□□□□ -0.08
COL21A1Q96P44 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.57□□□□□ -0.08
COL21A1Q96P44 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
COL21A1Q96P44 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.57□□□□□ -0.08
COL21A1Q96P44 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.57□□□□□ -0.08
COL21A1Q96P44 AJ011932.1-201ENST00000621707 465 ntBASIC14.57□□□□□ -0.08
COL21A1Q96P44 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
COL21A1Q96P44 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
COL21A1Q96P44 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
COL21A1Q96P44 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL21A1Q96P44 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
COL21A1Q96P44 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
COL21A1Q96P44 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
COL21A1Q96P44 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
COL21A1Q96P44 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL21A1Q96P44 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.57□□□□□ -0.08
COL21A1Q96P44 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
COL21A1Q96P44 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL21A1Q96P44 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL21A1Q96P44 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.56□□□□□ -0.08
COL21A1Q96P44 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL21A1Q96P44 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
COL21A1Q96P44 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL21A1Q96P44 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
COL21A1Q96P44 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL21A1Q96P44 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
COL21A1Q96P44 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.56□□□□□ -0.08
COL21A1Q96P44 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.56□□□□□ -0.08
COL21A1Q96P44 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL21A1Q96P44 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
COL21A1Q96P44 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
COL21A1Q96P44 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms