Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTCHD1Q96NR3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTCHD1Q96NR3 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 TTTY23B-201ENST00000442790 549 ntBASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 GIMAP3P-201ENST00000495150 836 ntBASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 AP001582.1-201ENST00000525856 295 ntBASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.5□□□□□ -0.09
PTCHD1Q96NR3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 AC138035.3-201ENST00000622706 2791 ntBASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.49□□□□□ -0.09
PTCHD1Q96NR3 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms