Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LRRC46Q96FV0 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
LRRC46Q96FV0 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRRC46Q96FV0 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.96□□□□□ -0.18
LRRC46Q96FV0 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRRC46Q96FV0 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRRC46Q96FV0 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRRC46Q96FV0 AL137784.3-201ENST00000623858 2288 ntBASIC13.95□□□□□ -0.18
LRRC46Q96FV0 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 SOCS2P1-201ENST00000417727 557 ntBASIC13.95□□□□□ -0.18
LRRC46Q96FV0 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 HIST3H2BA-201ENST00000436555 524 ntBASIC13.95□□□□□ -0.18
LRRC46Q96FV0 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 EEF1DP4-201ENST00000446006 880 ntBASIC13.95□□□□□ -0.18
LRRC46Q96FV0 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 AC233724.13-201ENST00000598383 410 ntBASIC13.95□□□□□ -0.18
LRRC46Q96FV0 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 AL161772.1-201ENST00000610494 4412 ntBASIC13.95□□□□□ -0.18
LRRC46Q96FV0 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.95□□□□□ -0.18
LRRC46Q96FV0 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRC46Q96FV0 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.94□□□□□ -0.18
LRRC46Q96FV0 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRRC46Q96FV0 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.94□□□□□ -0.18
LRRC46Q96FV0 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRC46Q96FV0 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRRC46Q96FV0 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRC46Q96FV0 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRRC46Q96FV0 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRRC46Q96FV0 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRC46Q96FV0 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
LRRC46Q96FV0 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.94□□□□□ -0.18
LRRC46Q96FV0 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LRRC46Q96FV0 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRC46Q96FV0 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.94□□□□□ -0.18
LRRC46Q96FV0 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRRC46Q96FV0 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRRC46Q96FV0 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.94□□□□□ -0.18
LRRC46Q96FV0 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.94□□□□□ -0.18
LRRC46Q96FV0 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.94□□□□□ -0.18
LRRC46Q96FV0 AC079776.1-201ENST00000401540 1152 ntBASIC13.94□□□□□ -0.18
LRRC46Q96FV0 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRC46Q96FV0 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.94□□□□□ -0.18
LRRC46Q96FV0 AC134915.1-201ENST00000426461 574 ntBASIC13.94□□□□□ -0.18
LRRC46Q96FV0 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.94□□□□□ -0.18
LRRC46Q96FV0 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRRC46Q96FV0 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LRRC46Q96FV0 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.94□□□□□ -0.18
LRRC46Q96FV0 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.94□□□□□ -0.18
LRRC46Q96FV0 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.94□□□□□ -0.18
LRRC46Q96FV0 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
LRRC46Q96FV0 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
LRRC46Q96FV0 PTP4A1P2-201ENST00000546033 454 ntBASIC13.94□□□□□ -0.18
LRRC46Q96FV0 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRRC46Q96FV0 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.94□□□□□ -0.18
LRRC46Q96FV0 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRC46Q96FV0 AC008735.3-201ENST00000596646 500 ntBASIC13.94□□□□□ -0.18
LRRC46Q96FV0 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.94□□□□□ -0.18
LRRC46Q96FV0 COX11-210ENST00000639671 696 ntBASIC13.94□□□□□ -0.18
LRRC46Q96FV0 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.94□□□□□ -0.18
LRRC46Q96FV0 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms