Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 AL162726.2-201ENST00000438986 1017 ntBASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 AC106886.1-201ENST00000568660 600 ntBASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 IGHV3-72-202ENST00000621503 303 ntBASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 AC136621.1-201ENST00000624017 2304 ntBASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.28■□□□□ 0.04
SH3KBP1Q96B97 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SH3KBP1Q96B97 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SH3KBP1Q96B97 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SH3KBP1Q96B97 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SH3KBP1Q96B97 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SH3KBP1Q96B97 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.27■□□□□ 0.04
SH3KBP1Q96B97 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SH3KBP1Q96B97 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.27■□□□□ 0.04
SH3KBP1Q96B97 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SH3KBP1Q96B97 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.27■□□□□ 0.04
SH3KBP1Q96B97 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SH3KBP1Q96B97 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SH3KBP1Q96B97 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SH3KBP1Q96B97 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.27■□□□□ 0.04
SH3KBP1Q96B97 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SH3KBP1Q96B97 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SH3KBP1Q96B97 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SH3KBP1Q96B97 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.27■□□□□ 0.04
SH3KBP1Q96B97 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.27■□□□□ 0.04
SH3KBP1Q96B97 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.27■□□□□ 0.04
SH3KBP1Q96B97 TTTY23B-201ENST00000442790 549 ntBASIC15.27■□□□□ 0.04
SH3KBP1Q96B97 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.27■□□□□ 0.04
SH3KBP1Q96B97 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
SH3KBP1Q96B97 RN7SL837P-201ENST00000463010 287 ntBASIC15.27■□□□□ 0.04
SH3KBP1Q96B97 KRT18P43-201ENST00000469825 1281 ntBASIC15.27■□□□□ 0.04
SH3KBP1Q96B97 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.27■□□□□ 0.04
SH3KBP1Q96B97 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SH3KBP1Q96B97 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.27■□□□□ 0.04
SH3KBP1Q96B97 AC132938.2-201ENST00000579188 680 ntBASIC15.27■□□□□ 0.04
SH3KBP1Q96B97 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.27■□□□□ 0.04
SH3KBP1Q96B97 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
SH3KBP1Q96B97 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.27■□□□□ 0.04
SH3KBP1Q96B97 AL162274.1-201ENST00000617191 1098 ntBASIC15.27■□□□□ 0.04
SH3KBP1Q96B97 AL591163.1-201ENST00000641757 987 ntBASIC15.27■□□□□ 0.04
SH3KBP1Q96B97 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.27■□□□□ 0.03
SH3KBP1Q96B97 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
SH3KBP1Q96B97 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SH3KBP1Q96B97 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
SH3KBP1Q96B97 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SH3KBP1Q96B97 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
SH3KBP1Q96B97 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.27■□□□□ 0.03
SH3KBP1Q96B97 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SH3KBP1Q96B97 SSR4P1-203ENST00000599569 2260 ntBASIC15.27■□□□□ 0.03
SH3KBP1Q96B97 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SH3KBP1Q96B97 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SH3KBP1Q96B97 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SH3KBP1Q96B97 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SH3KBP1Q96B97 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 AC015936.2-201ENST00000593177 259 ntBASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 BRI3BPP1-201ENST00000594224 787 ntBASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 AL359881.2-201ENST00000602973 570 ntBASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms