Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNFRSF25Q93038 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 AP001889.1-201ENST00000525414 633 ntBASIC17.31■□□□□ 0.36
TNFRSF25Q93038 AC068587.3-201ENST00000526613 355 ntBASIC17.31■□□□□ 0.36
TNFRSF25Q93038 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 AC132938.2-201ENST00000579188 680 ntBASIC17.31■□□□□ 0.36
TNFRSF25Q93038 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 AC027307.3-201ENST00000594262 1100 ntBASIC17.31■□□□□ 0.36
TNFRSF25Q93038 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 AL591163.1-201ENST00000641757 987 ntBASIC17.31■□□□□ 0.36
TNFRSF25Q93038 AC105233.6-201ENST00000642093 218 ntBASIC17.31■□□□□ 0.36
TNFRSF25Q93038 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF25Q93038 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.3■□□□□ 0.36
TNFRSF25Q93038 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TNFRSF25Q93038 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFRSF25Q93038 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFRSF25Q93038 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TNFRSF25Q93038 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TNFRSF25Q93038 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.3■□□□□ 0.36
TNFRSF25Q93038 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.3■□□□□ 0.36
TNFRSF25Q93038 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFRSF25Q93038 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TNFRSF25Q93038 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TNFRSF25Q93038 AC134312.5-201ENST00000568031 1313 ntBASIC17.3■□□□□ 0.36
TNFRSF25Q93038 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFRSF25Q93038 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.3■□□□□ 0.36
TNFRSF25Q93038 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFRSF25Q93038 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFRSF25Q93038 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
TNFRSF25Q93038 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.3■□□□□ 0.36
TNFRSF25Q93038 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFRSF25Q93038 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.3■□□□□ 0.36
TNFRSF25Q93038 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFRSF25Q93038 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.3■□□□□ 0.36
TNFRSF25Q93038 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.3■□□□□ 0.36
TNFRSF25Q93038 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.3■□□□□ 0.36
TNFRSF25Q93038 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFRSF25Q93038 AC106760.1-201ENST00000508690 800 ntBASIC17.3■□□□□ 0.36
TNFRSF25Q93038 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.3■□□□□ 0.36
TNFRSF25Q93038 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TNFRSF25Q93038 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.3■□□□□ 0.36
TNFRSF25Q93038 LINC02084-201ENST00000606069 1096 ntBASIC17.3■□□□□ 0.36
TNFRSF25Q93038 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.3■□□□□ 0.36
TNFRSF25Q93038 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TNFRSF25Q93038 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFRSF25Q93038 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TNFRSF25Q93038 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFRSF25Q93038 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TNFRSF25Q93038 MTHFR-210ENST00000641407 2387 ntBASIC17.3■□□□□ 0.36
TNFRSF25Q93038 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.3■□□□□ 0.36
TNFRSF25Q93038 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFRSF25Q93038 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFRSF25Q93038 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.3■□□□□ 0.36
TNFRSF25Q93038 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFRSF25Q93038 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TNFRSF25Q93038 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TNFRSF25Q93038 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TNFRSF25Q93038 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFRSF25Q93038 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.29■□□□□ 0.36
TNFRSF25Q93038 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TNFRSF25Q93038 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TNFRSF25Q93038 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.29■□□□□ 0.36
TNFRSF25Q93038 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TNFRSF25Q93038 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.29■□□□□ 0.36
TNFRSF25Q93038 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms