Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CNOT9Q92600 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CNOT9Q92600 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CNOT9Q92600 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CNOT9Q92600 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CNOT9Q92600 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CNOT9Q92600 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CNOT9Q92600 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CNOT9Q92600 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CNOT9Q92600 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CNOT9Q92600 WASH3P-207ENST00000560956 1394 ntBASIC14.21□□□□□ -0.14
CNOT9Q92600 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CNOT9Q92600 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.21□□□□□ -0.14
CNOT9Q92600 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CNOT9Q92600 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNOT9Q92600 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
CNOT9Q92600 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CNOT9Q92600 PCDHA3-202ENST00000532566 4594 ntBASIC14.2□□□□□ -0.14
CNOT9Q92600 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CNOT9Q92600 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CNOT9Q92600 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNOT9Q92600 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.2□□□□□ -0.14
CNOT9Q92600 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNOT9Q92600 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNOT9Q92600 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNOT9Q92600 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.2□□□□□ -0.14
CNOT9Q92600 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.2□□□□□ -0.14
CNOT9Q92600 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.2□□□□□ -0.14
CNOT9Q92600 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CNOT9Q92600 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CNOT9Q92600 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNOT9Q92600 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNOT9Q92600 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.2□□□□□ -0.14
CNOT9Q92600 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
CNOT9Q92600 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNOT9Q92600 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CNOT9Q92600 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CNOT9Q92600 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CNOT9Q92600 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CNOT9Q92600 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.2□□□□□ -0.14
CNOT9Q92600 AL512638.1-201ENST00000457493 794 ntBASIC14.2□□□□□ -0.14
CNOT9Q92600 MEIS3P1-201ENST00000495167 958 ntBASIC14.2□□□□□ -0.14
CNOT9Q92600 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.2□□□□□ -0.14
CNOT9Q92600 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.2□□□□□ -0.14
CNOT9Q92600 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CNOT9Q92600 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.2□□□□□ -0.14
CNOT9Q92600 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.2□□□□□ -0.14
CNOT9Q92600 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.2□□□□□ -0.14
CNOT9Q92600 AC005498.2-205ENST00000593218 784 ntBASIC14.2□□□□□ -0.14
CNOT9Q92600 SRD5A3P1-201ENST00000603021 949 ntBASIC14.2□□□□□ -0.14
CNOT9Q92600 AC000095.1-201ENST00000603208 874 ntBASIC14.2□□□□□ -0.14
CNOT9Q92600 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNOT9Q92600 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNOT9Q92600 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNOT9Q92600 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CNOT9Q92600 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.2□□□□□ -0.14
CNOT9Q92600 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CNOT9Q92600 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNOT9Q92600 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNOT9Q92600 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.2□□□□□ -0.14
CNOT9Q92600 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CNOT9Q92600 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNOT9Q92600 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CNOT9Q92600 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.2□□□□□ -0.14
CNOT9Q92600 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNOT9Q92600 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNOT9Q92600 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.2□□□□□ -0.14
CNOT9Q92600 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.2□□□□□ -0.14
CNOT9Q92600 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CNOT9Q92600 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNOT9Q92600 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CNOT9Q92600 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.2□□□□□ -0.14
CNOT9Q92600 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
CNOT9Q92600 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT9Q92600 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT9Q92600 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT9Q92600 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT9Q92600 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT9Q92600 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CNOT9Q92600 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT9Q92600 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT9Q92600 OR2I1P-209ENST00000641730 5365 ntBASIC14.19□□□□□ -0.14
CNOT9Q92600 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
CNOT9Q92600 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT9Q92600 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.19□□□□□ -0.14
CNOT9Q92600 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT9Q92600 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT9Q92600 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT9Q92600 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT9Q92600 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT9Q92600 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CNOT9Q92600 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT9Q92600 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT9Q92600 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.19□□□□□ -0.14
CNOT9Q92600 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.19□□□□□ -0.14
CNOT9Q92600 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.19□□□□□ -0.14
CNOT9Q92600 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.19□□□□□ -0.14
CNOT9Q92600 AC093214.1-201ENST00000511688 1107 ntBASIC14.19□□□□□ -0.14
CNOT9Q92600 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CNOT9Q92600 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms