Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.83□□□□□ -0.19
PHF3Q92576 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.83□□□□□ -0.19
PHF3Q92576 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
PHF3Q92576 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
PHF3Q92576 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
PHF3Q92576 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.83□□□□□ -0.2
PHF3Q92576 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.83□□□□□ -0.2
PHF3Q92576 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.83□□□□□ -0.2
PHF3Q92576 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
PHF3Q92576 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.83□□□□□ -0.2
PHF3Q92576 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.83□□□□□ -0.2
PHF3Q92576 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.83□□□□□ -0.2
PHF3Q92576 MIR6787-201ENST00000616675 61 ntBASIC13.83□□□□□ -0.2
PHF3Q92576 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
PHF3Q92576 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PHF3Q92576 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PHF3Q92576 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
PHF3Q92576 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.83□□□□□ -0.2
PHF3Q92576 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PHF3Q92576 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
PHF3Q92576 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PHF3Q92576 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PHF3Q92576 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PHF3Q92576 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PHF3Q92576 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
PHF3Q92576 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PHF3Q92576 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PHF3Q92576 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PHF3Q92576 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PHF3Q92576 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
PHF3Q92576 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
PHF3Q92576 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PHF3Q92576 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.83□□□□□ -0.2
PHF3Q92576 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PHF3Q92576 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
PHF3Q92576 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
PHF3Q92576 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PHF3Q92576 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
PHF3Q92576 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
PHF3Q92576 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PHF3Q92576 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PHF3Q92576 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.83□□□□□ -0.2
PHF3Q92576 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PHF3Q92576 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.83□□□□□ -0.2
PHF3Q92576 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PHF3Q92576 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.83□□□□□ -0.2
PHF3Q92576 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.83□□□□□ -0.2
PHF3Q92576 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.83□□□□□ -0.2
PHF3Q92576 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.83□□□□□ -0.2
PHF3Q92576 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.83□□□□□ -0.2
PHF3Q92576 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.83□□□□□ -0.2
PHF3Q92576 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PHF3Q92576 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.83□□□□□ -0.2
PHF3Q92576 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.83□□□□□ -0.2
PHF3Q92576 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PHF3Q92576 GPR182-203ENST00000622922 591 ntBASIC13.83□□□□□ -0.2
PHF3Q92576 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
PHF3Q92576 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
PHF3Q92576 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PHF3Q92576 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PHF3Q92576 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PHF3Q92576 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
PHF3Q92576 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.82□□□□□ -0.2
PHF3Q92576 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.82□□□□□ -0.2
PHF3Q92576 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PHF3Q92576 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PHF3Q92576 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PHF3Q92576 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
PHF3Q92576 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
PHF3Q92576 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PHF3Q92576 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
PHF3Q92576 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
PHF3Q92576 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PHF3Q92576 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
PHF3Q92576 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PHF3Q92576 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PHF3Q92576 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
PHF3Q92576 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PHF3Q92576 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PHF3Q92576 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.82□□□□□ -0.2
PHF3Q92576 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PHF3Q92576 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PHF3Q92576 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PHF3Q92576 MIR1202-201ENST00000408529 83 ntBASIC13.82□□□□□ -0.2
PHF3Q92576 AC007969.1-201ENST00000433675 447 ntBASIC13.82□□□□□ -0.2
PHF3Q92576 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
PHF3Q92576 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
PHF3Q92576 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.82□□□□□ -0.2
PHF3Q92576 RN7SL219P-201ENST00000582872 296 ntBASIC13.82□□□□□ -0.2
PHF3Q92576 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.82□□□□□ -0.2
PHF3Q92576 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.82□□□□□ -0.2
PHF3Q92576 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.82□□□□□ -0.2
PHF3Q92576 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
PHF3Q92576 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PHF3Q92576 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
PHF3Q92576 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PHF3Q92576 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PHF3Q92576 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.82□□□□□ -0.2
PHF3Q92576 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PHF3Q92576 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms