Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SYNE2Q8WXH0 CSTF3-203ENST00000438862 1132 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SYNE2Q8WXH0 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC5.96□□□□□ -1.45
SYNE2Q8WXH0 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
SYNE2Q8WXH0 GPAA1P2-202ENST00000606848 1787 ntBASIC5.96□□□□□ -1.45
SYNE2Q8WXH0 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SYNE2Q8WXH0 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SYNE2Q8WXH0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC5.96□□□□□ -1.45
SYNE2Q8WXH0 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SYNE2Q8WXH0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC5.96□□□□□ -1.45
SYNE2Q8WXH0 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
SYNE2Q8WXH0 KRT8P14-201ENST00000414254 1442 ntBASIC5.96□□□□□ -1.45
SYNE2Q8WXH0 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SYNE2Q8WXH0 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC5.96□□□□□ -1.45
SYNE2Q8WXH0 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
SYNE2Q8WXH0 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
SYNE2Q8WXH0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SYNE2Q8WXH0 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.45
SYNE2Q8WXH0 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SYNE2Q8WXH0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
SYNE2Q8WXH0 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SYNE2Q8WXH0 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
SYNE2Q8WXH0 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SYNE2Q8WXH0 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SYNE2Q8WXH0 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
SYNE2Q8WXH0 AL157407.1-201ENST00000435784 904 ntBASIC5.96□□□□□ -1.45
SYNE2Q8WXH0 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SYNE2Q8WXH0 AC027277.1-201ENST00000535363 533 ntTSL 3 BASIC5.96□□□□□ -1.45
SYNE2Q8WXH0 AC015688.5-201ENST00000584605 603 ntAPPRIS P5 TSL 2 BASIC5.96□□□□□ -1.45
SYNE2Q8WXH0 AC007378.1-201ENST00000609765 478 ntBASIC5.96□□□□□ -1.45
SYNE2Q8WXH0 TEAD1-207ENST00000638666 1281 ntAPPRIS P2 TSL 2 BASIC5.96□□□□□ -1.45
SYNE2Q8WXH0 REXO1L2P-201ENST00000425429 2069 ntBASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 RNASE11-201ENST00000398008 872 ntAPPRIS P2 TSL 2 BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 AL512288.2-201ENST00000426041 367 ntBASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 AC090192.2-201ENST00000517482 553 ntTSL 4 BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 AP000439.1-201ENST00000544004 581 ntTSL 4 BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 HNRNPA1P69-201ENST00000552536 933 ntBASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 LINC01615-203ENST00000634877 673 ntTSL 5 BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 AC011840.2-201ENST00000563063 1520 ntBASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 MFF-204ENST00000353339 2186 ntTSL 5 BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 POP5-201ENST00000341039 913 ntTSL 2 BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 KRTAP2-2-202ENST00000542910 390 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 AC015802.4-203ENST00000592622 570 ntTSL 4 BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 AL359092.2-201ENST00000423330 585 ntBASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
SYNE2Q8WXH0 AL591499.1-201ENST00000307155 1153 ntBASIC5.95□□□□□ -1.46
SYNE2Q8WXH0 FAM96A-202ENST00000380290 826 ntTSL 2 BASIC5.95□□□□□ -1.46
SYNE2Q8WXH0 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SYNE2Q8WXH0 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SYNE2Q8WXH0 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC5.95□□□□□ -1.46
SYNE2Q8WXH0 AC104521.1-201ENST00000598582 279 ntTSL 5 BASIC5.95□□□□□ -1.46
SYNE2Q8WXH0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SYNE2Q8WXH0 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SYNE2Q8WXH0 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SYNE2Q8WXH0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SYNE2Q8WXH0 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SYNE2Q8WXH0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SYNE2Q8WXH0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SYNE2Q8WXH0 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SYNE2Q8WXH0 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SYNE2Q8WXH0 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
SYNE2Q8WXH0 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SYNE2Q8WXH0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SYNE2Q8WXH0 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
SYNE2Q8WXH0 RBP1-201ENST00000232219 898 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SYNE2Q8WXH0 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms