Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 AL022334.2-201ENST00000610000 484 ntBASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 AC073592.2-201ENST00000623062 780 ntBASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 ZBTB45P1-201ENST00000452761 1456 ntBASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
ALMS1Q8TCU4 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
ALMS1Q8TCU4 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC10□□□□□ -0.81
ALMS1Q8TCU4 RN7SL494P-201ENST00000461517 304 ntBASIC10□□□□□ -0.81
ALMS1Q8TCU4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
ALMS1Q8TCU4 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
ALMS1Q8TCU4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
ALMS1Q8TCU4 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC10□□□□□ -0.81
ALMS1Q8TCU4 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
ALMS1Q8TCU4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
ALMS1Q8TCU4 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
ALMS1Q8TCU4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC10□□□□□ -0.81
ALMS1Q8TCU4 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
ALMS1Q8TCU4 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC10□□□□□ -0.81
ALMS1Q8TCU4 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC10□□□□□ -0.81
ALMS1Q8TCU4 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC10□□□□□ -0.81
ALMS1Q8TCU4 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC10□□□□□ -0.81
ALMS1Q8TCU4 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC10□□□□□ -0.81
ALMS1Q8TCU4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC10□□□□□ -0.81
ALMS1Q8TCU4 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
ALMS1Q8TCU4 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
ALMS1Q8TCU4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC10□□□□□ -0.81
ALMS1Q8TCU4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
ALMS1Q8TCU4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC10□□□□□ -0.81
ALMS1Q8TCU4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC10□□□□□ -0.81
ALMS1Q8TCU4 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
ALMS1Q8TCU4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
ALMS1Q8TCU4 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
ALMS1Q8TCU4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
ALMS1Q8TCU4 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC10□□□□□ -0.81
ALMS1Q8TCU4 HNRNPA1P27-201ENST00000412087 955 ntBASIC10□□□□□ -0.81
ALMS1Q8TCU4 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC10□□□□□ -0.81
ALMS1Q8TCU4 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
ALMS1Q8TCU4 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
ALMS1Q8TCU4 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC10□□□□□ -0.81
ALMS1Q8TCU4 TRMT112P3-201ENST00000580149 358 ntBASIC10□□□□□ -0.81
ALMS1Q8TCU4 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC10□□□□□ -0.81
ALMS1Q8TCU4 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC10□□□□□ -0.81
ALMS1Q8TCU4 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
ALMS1Q8TCU4 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
ALMS1Q8TCU4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
ALMS1Q8TCU4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC10□□□□□ -0.81
ALMS1Q8TCU4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
ALMS1Q8TCU4 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC10□□□□□ -0.81
ALMS1Q8TCU4 FAM90A21P-201ENST00000510875 1396 ntBASIC10□□□□□ -0.81
ALMS1Q8TCU4 FAM90A15P-201ENST00000514465 1395 ntBASIC10□□□□□ -0.81
ALMS1Q8TCU4 FAM90A6P-201ENST00000515148 1394 ntBASIC10□□□□□ -0.81
ALMS1Q8TCU4 FAM90A16P-201ENST00000526662 1395 ntBASIC10□□□□□ -0.81
ALMS1Q8TCU4 FAM90A9P-201ENST00000527940 1395 ntBASIC10□□□□□ -0.81
ALMS1Q8TCU4 FAM90A5P-201ENST00000528738 1395 ntBASIC10□□□□□ -0.81
ALMS1Q8TCU4 FAM90A14P-201ENST00000530386 1395 ntBASIC10□□□□□ -0.81
ALMS1Q8TCU4 FAM90A13P-201ENST00000534703 1395 ntBASIC10□□□□□ -0.81
ALMS1Q8TCU4 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
ALMS1Q8TCU4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
ALMS1Q8TCU4 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
ALMS1Q8TCU4 CSNK1G2P1-201ENST00000442675 955 ntBASIC10□□□□□ -0.81
ALMS1Q8TCU4 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC10□□□□□ -0.81
ALMS1Q8TCU4 SRP14-204ENST00000558720 780 ntTSL 2 BASIC10□□□□□ -0.81
ALMS1Q8TCU4 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC10□□□□□ -0.81
ALMS1Q8TCU4 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC10□□□□□ -0.81
ALMS1Q8TCU4 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC10□□□□□ -0.81
ALMS1Q8TCU4 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
ALMS1Q8TCU4 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC10□□□□□ -0.81
ALMS1Q8TCU4 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC10□□□□□ -0.81
ALMS1Q8TCU4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 CELP-201ENST00000411440 1249 ntTSL 5 BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC9.99□□□□□ -0.81
ALMS1Q8TCU4 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC9.99□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms