Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 KRT18P28-201ENST00000453838 1332 ntBASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 AL009178.2-201ENST00000597278 2719 ntBASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 MIR193BHG-211ENST00000641433 5365 ntBASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 TOMM22P5-201ENST00000416399 439 ntBASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 TREML5P-201ENST00000421694 576 ntBASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 METTL21AP1-201ENST00000438852 635 ntBASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 SDHAP3-202ENST00000515467 728 ntBASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 AF228730.6-201ENST00000641497 218 ntBASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 AC084121.3-201ENST00000641716 218 ntBASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 AL109936.8-201ENST00000641772 604 ntBASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 TNRC18P2-201ENST00000417666 2714 ntBASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 AC100757.3-201ENST00000622361 1406 ntBASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
ZNF439Q8NDP4 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF439Q8NDP4 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms