Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 AC092933.1-201ENST00000393644 945 ntBASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 U91328.1-201ENST00000437528 223 ntBASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 BCRP2-202ENST00000447763 634 ntBASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 AC106760.1-201ENST00000508690 800 ntBASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 BCRP6-201ENST00000510112 632 ntBASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 BCRP7-201ENST00000511549 544 ntBASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 AL157414.3-201ENST00000624276 1954 ntBASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRAM1L1Q8N609 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 AC145423.3-201ENST00000615987 467 ntBASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 AL359258.3-201ENST00000622910 2331 ntBASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAM1L1Q8N609 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 LILRP1-201ENST00000444199 1370 ntBASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAM1L1Q8N609 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms