Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SYNPOQ8N3V7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 KRT8P19-201ENST00000551916 1455 ntBASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 MIR769-201ENST00000390225 118 ntBASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 EIF4HP1-201ENST00000453115 687 ntBASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 SERPINA13P-202ENST00000478994 924 ntBASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 RN7SL713P-201ENST00000582127 302 ntBASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 AL451050.2-201ENST00000606967 682 ntBASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 AL645728.2-202ENST00000641679 227 ntBASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SYNPOQ8N3V7 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
SYNPOQ8N3V7 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SYNPOQ8N3V7 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SYNPOQ8N3V7 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SYNPOQ8N3V7 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SYNPOQ8N3V7 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SYNPOQ8N3V7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SYNPOQ8N3V7 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SYNPOQ8N3V7 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SYNPOQ8N3V7 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SYNPOQ8N3V7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SYNPOQ8N3V7 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SYNPOQ8N3V7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SYNPOQ8N3V7 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SYNPOQ8N3V7 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SYNPOQ8N3V7 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
SYNPOQ8N3V7 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.54■□□□□ 0.08
SYNPOQ8N3V7 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.54■□□□□ 0.08
SYNPOQ8N3V7 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC15.54■□□□□ 0.08
SYNPOQ8N3V7 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC15.54■□□□□ 0.08
SYNPOQ8N3V7 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.54■□□□□ 0.08
SYNPOQ8N3V7 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SYNPOQ8N3V7 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
SYNPOQ8N3V7 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SYNPOQ8N3V7 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SYNPOQ8N3V7 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SYNPOQ8N3V7 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
SYNPOQ8N3V7 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SYNPOQ8N3V7 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SYNPOQ8N3V7 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
SYNPOQ8N3V7 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SYNPOQ8N3V7 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
SYNPOQ8N3V7 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.53■□□□□ 0.08
SYNPOQ8N3V7 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms