Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 METTL21AP1-201ENST00000438852 635 ntBASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 KRT18P43-201ENST00000469825 1281 ntBASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 AL844908.2-201ENST00000609461 460 ntBASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
LINC00346Q8IVM7 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
LINC00346Q8IVM7 AC087499.5-201ENST00000452760 1342 ntBASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 AC100757.3-201ENST00000622361 1406 ntBASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 REXO1L2P-201ENST00000425429 2069 ntBASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 MIR943-201ENST00000401286 94 ntBASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 AC015911.4-201ENST00000588022 1070 ntBASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC00346Q8IVM7 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 ACE3P-201ENST00000423435 1973 ntBASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00346Q8IVM7 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms