Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AL161670.2-201ENST00000557650 1227 ntBASIC16.27■□□□□ 0.2
NPAS4Q8IUM7 MIR4783-201ENST00000580343 82 ntBASIC16.27■□□□□ 0.2
NPAS4Q8IUM7 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.27■□□□□ 0.2
NPAS4Q8IUM7 AL136295.7-201ENST00000619226 1200 ntBASIC16.27■□□□□ 0.2
NPAS4Q8IUM7 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
NPAS4Q8IUM7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPAS4Q8IUM7 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPAS4Q8IUM7 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NPAS4Q8IUM7 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
NPAS4Q8IUM7 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
NPAS4Q8IUM7 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
NPAS4Q8IUM7 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NPAS4Q8IUM7 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
NPAS4Q8IUM7 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.27■□□□□ 0.19
NPAS4Q8IUM7 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.27■□□□□ 0.19
NPAS4Q8IUM7 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.27■□□□□ 0.19
NPAS4Q8IUM7 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.19
NPAS4Q8IUM7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
NPAS4Q8IUM7 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NPAS4Q8IUM7 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NPAS4Q8IUM7 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 LINC02199-201ENST00000506655 2702 ntBASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 AC020916.1-201ENST00000587762 1774 ntBASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 SHC1P1-201ENST00000425230 1745 ntBASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 AC007274.2-201ENST00000421675 662 ntBASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 NUP210P1-202ENST00000504322 710 ntBASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 MIR3907-201ENST00000579424 151 ntBASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 AC105250.1-201ENST00000509378 2057 ntBASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NPAS4Q8IUM7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 AL139384.1-201ENST00000612143 3047 ntBASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 AC091046.1-201ENST00000331871 207 ntBASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 AC010141.1-201ENST00000411585 623 ntBASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 FAM58BP-201ENST00000439056 645 ntBASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 MPRIPP1-201ENST00000452433 1089 ntBASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 DUX4L46-201ENST00000566845 751 ntBASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 MIR4706-201ENST00000582134 82 ntBASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 AC090164.2-201ENST00000611487 516 ntBASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 AC128714.1-201ENST00000637035 887 ntBASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NPAS4Q8IUM7 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms