Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC28Q86X40 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC28Q86X40 REXO1L1P-202ENST00000608646 1974 ntBASIC13.76□□□□□ -0.21
LRRC28Q86X40 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.76□□□□□ -0.21
LRRC28Q86X40 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LRRC28Q86X40 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC28Q86X40 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC28Q86X40 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRC28Q86X40 AC027601.5-201ENST00000624065 2482 ntBASIC13.75□□□□□ -0.21
LRRC28Q86X40 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRC28Q86X40 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LRRC28Q86X40 LINC01230-201ENST00000625222 3017 ntBASIC13.75□□□□□ -0.21
LRRC28Q86X40 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRC28Q86X40 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.75□□□□□ -0.21
LRRC28Q86X40 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRC28Q86X40 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
LRRC28Q86X40 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
LRRC28Q86X40 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRC28Q86X40 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRC28Q86X40 WASH3P-207ENST00000560956 1394 ntBASIC13.75□□□□□ -0.21
LRRC28Q86X40 FO538757.1-201ENST00000623083 1397 ntBASIC13.75□□□□□ -0.21
LRRC28Q86X40 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRC28Q86X40 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LRRC28Q86X40 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRC28Q86X40 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRC28Q86X40 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
LRRC28Q86X40 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LRRC28Q86X40 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LRRC28Q86X40 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.75□□□□□ -0.21
LRRC28Q86X40 SPDYE14P-201ENST00000442619 822 ntBASIC13.75□□□□□ -0.21
LRRC28Q86X40 CNN2P2-201ENST00000443536 909 ntBASIC13.75□□□□□ -0.21
LRRC28Q86X40 CNN2P3-201ENST00000450201 906 ntBASIC13.75□□□□□ -0.21
LRRC28Q86X40 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.75□□□□□ -0.21
LRRC28Q86X40 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.75□□□□□ -0.21
LRRC28Q86X40 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.75□□□□□ -0.21
LRRC28Q86X40 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.75□□□□□ -0.21
LRRC28Q86X40 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.75□□□□□ -0.21
LRRC28Q86X40 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRC28Q86X40 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.75□□□□□ -0.21
LRRC28Q86X40 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRC28Q86X40 AL136317.3-201ENST00000618497 906 ntBASIC13.75□□□□□ -0.21
LRRC28Q86X40 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.75□□□□□ -0.21
LRRC28Q86X40 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.75□□□□□ -0.21
LRRC28Q86X40 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.75□□□□□ -0.21
LRRC28Q86X40 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRC28Q86X40 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRC28Q86X40 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.75□□□□□ -0.21
LRRC28Q86X40 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.75□□□□□ -0.21
LRRC28Q86X40 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
LRRC28Q86X40 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRC28Q86X40 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRC28Q86X40 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRC28Q86X40 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRC28Q86X40 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRC28Q86X40 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
LRRC28Q86X40 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRC28Q86X40 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRRC28Q86X40 AC015656.1-201ENST00000624209 3578 ntBASIC13.75□□□□□ -0.21
LRRC28Q86X40 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.74□□□□□ -0.21
LRRC28Q86X40 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC28Q86X40 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC28Q86X40 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
LRRC28Q86X40 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC28Q86X40 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LRRC28Q86X40 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.74□□□□□ -0.21
LRRC28Q86X40 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC28Q86X40 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LRRC28Q86X40 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.74□□□□□ -0.21
LRRC28Q86X40 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC28Q86X40 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
LRRC28Q86X40 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC28Q86X40 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.74□□□□□ -0.21
LRRC28Q86X40 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC28Q86X40 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.74□□□□□ -0.21
LRRC28Q86X40 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC28Q86X40 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC28Q86X40 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC28Q86X40 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC28Q86X40 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC28Q86X40 FAM86GP-201ENST00000448322 971 ntBASIC13.74□□□□□ -0.21
LRRC28Q86X40 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.74□□□□□ -0.21
LRRC28Q86X40 CYMP-203ENST00000474680 1263 ntBASIC13.74□□□□□ -0.21
LRRC28Q86X40 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.74□□□□□ -0.21
LRRC28Q86X40 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LRRC28Q86X40 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.74□□□□□ -0.21
LRRC28Q86X40 MIR4313-201ENST00000580760 101 ntBASIC13.74□□□□□ -0.21
LRRC28Q86X40 AC106028.4-201ENST00000614509 607 ntBASIC13.74□□□□□ -0.21
LRRC28Q86X40 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.74□□□□□ -0.21
LRRC28Q86X40 Z92544.3-201ENST00000624747 417 ntBASIC13.74□□□□□ -0.21
LRRC28Q86X40 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.74□□□□□ -0.21
LRRC28Q86X40 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC28Q86X40 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.74□□□□□ -0.21
LRRC28Q86X40 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
LRRC28Q86X40 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.74□□□□□ -0.21
LRRC28Q86X40 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
LRRC28Q86X40 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC28Q86X40 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC28Q86X40 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRC28Q86X40 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.74□□□□□ -0.21
LRRC28Q86X40 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms