Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC11.98□□□□□ -0.49
KCNIP4Q6PIL6 LINC01711-201ENST00000598340 967 ntBASIC11.98□□□□□ -0.49
KCNIP4Q6PIL6 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
KCNIP4Q6PIL6 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
KCNIP4Q6PIL6 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
KCNIP4Q6PIL6 BCL10-202ENST00000620248 774 ntTSL 5 BASIC11.98□□□□□ -0.49
KCNIP4Q6PIL6 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC11.98□□□□□ -0.49
KCNIP4Q6PIL6 AL139385.1-201ENST00000611744 3272 ntBASIC11.98□□□□□ -0.49
KCNIP4Q6PIL6 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
KCNIP4Q6PIL6 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
KCNIP4Q6PIL6 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC11.98□□□□□ -0.49
KCNIP4Q6PIL6 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC11.98□□□□□ -0.49
KCNIP4Q6PIL6 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC11.98□□□□□ -0.49
KCNIP4Q6PIL6 MEX3B-202ENST00000558133 4333 ntBASIC11.98□□□□□ -0.49
KCNIP4Q6PIL6 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
KCNIP4Q6PIL6 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
KCNIP4Q6PIL6 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
KCNIP4Q6PIL6 SLC9A3P2-201ENST00000447821 2021 ntBASIC11.98□□□□□ -0.49
KCNIP4Q6PIL6 ACE3P-201ENST00000423435 1973 ntBASIC11.98□□□□□ -0.49
KCNIP4Q6PIL6 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
KCNIP4Q6PIL6 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 PMPCAP1-201ENST00000508114 1576 ntBASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 LSS-211ENST00000522411 2523 ntTSL 2 BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 USP4-203ENST00000415188 1454 ntTSL 3 BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 AC015802.1-201ENST00000588104 1449 ntBASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 AC090114.2-201ENST00000608477 7054 ntBASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 AC233702.3-201ENST00000578656 1387 ntBASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 AC016734.2-201ENST00000624325 1377 ntBASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 AL805961.2-201ENST00000642139 4817 ntBASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 PMS2P1-201ENST00000431037 1228 ntBASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 KRT17P6-201ENST00000453795 1220 ntBASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 PTK2-216ENST00000519881 863 ntTSL 3 BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 CIB2-208ENST00000560618 804 ntTSL 2 BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 NT5C-211ENST00000582170 653 ntTSL 3 BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 AC092329.2-201ENST00000598402 547 ntBASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 AC093458.2-201ENST00000623150 629 ntBASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 AC015909.5-201ENST00000624336 2266 ntBASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
KCNIP4Q6PIL6 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
KCNIP4Q6PIL6 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
KCNIP4Q6PIL6 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC11.96□□□□□ -0.49
KCNIP4Q6PIL6 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC11.96□□□□□ -0.49
KCNIP4Q6PIL6 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
KCNIP4Q6PIL6 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
KCNIP4Q6PIL6 TP73-AS1-210ENST00000637775 1455 ntBASIC11.96□□□□□ -0.49
KCNIP4Q6PIL6 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC11.96□□□□□ -0.49
KCNIP4Q6PIL6 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
KCNIP4Q6PIL6 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
KCNIP4Q6PIL6 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
KCNIP4Q6PIL6 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
KCNIP4Q6PIL6 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
KCNIP4Q6PIL6 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms