Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC025183.3-201ENST00000623526 1482 ntBASIC14.63□□□□□ -0.07
RIF1Q5UIP0 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RIF1Q5UIP0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RIF1Q5UIP0 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RIF1Q5UIP0 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC14.63□□□□□ -0.07
RIF1Q5UIP0 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RIF1Q5UIP0 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RIF1Q5UIP0 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.63□□□□□ -0.07
RIF1Q5UIP0 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RIF1Q5UIP0 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RIF1Q5UIP0 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RIF1Q5UIP0 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RIF1Q5UIP0 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
RIF1Q5UIP0 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.63□□□□□ -0.07
RIF1Q5UIP0 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.63□□□□□ -0.07
RIF1Q5UIP0 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RIF1Q5UIP0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.63□□□□□ -0.07
RIF1Q5UIP0 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RIF1Q5UIP0 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RIF1Q5UIP0 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
RIF1Q5UIP0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RIF1Q5UIP0 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RIF1Q5UIP0 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RIF1Q5UIP0 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RIF1Q5UIP0 SURF4-203ENST00000371991 715 ntTSL 3 BASIC14.63□□□□□ -0.07
RIF1Q5UIP0 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.63□□□□□ -0.07
RIF1Q5UIP0 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC14.63□□□□□ -0.07
RIF1Q5UIP0 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC14.63□□□□□ -0.07
RIF1Q5UIP0 RPL35P9-201ENST00000446059 350 ntBASIC14.63□□□□□ -0.07
RIF1Q5UIP0 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RIF1Q5UIP0 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC14.63□□□□□ -0.07
RIF1Q5UIP0 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RIF1Q5UIP0 AC009884.2-201ENST00000603110 324 ntBASIC14.63□□□□□ -0.07
RIF1Q5UIP0 PSME2-217ENST00000615264 874 ntTSL 5 BASIC14.63□□□□□ -0.07
RIF1Q5UIP0 PSME2-218ENST00000630027 185 ntTSL 3 BASIC14.63□□□□□ -0.07
RIF1Q5UIP0 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RIF1Q5UIP0 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.62□□□□□ -0.07
RIF1Q5UIP0 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.62□□□□□ -0.07
RIF1Q5UIP0 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RIF1Q5UIP0 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RIF1Q5UIP0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RIF1Q5UIP0 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RIF1Q5UIP0 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.62□□□□□ -0.07
RIF1Q5UIP0 AC007613.1-201ENST00000572811 2597 ntBASIC14.62□□□□□ -0.07
RIF1Q5UIP0 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RIF1Q5UIP0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RIF1Q5UIP0 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RIF1Q5UIP0 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RIF1Q5UIP0 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
RIF1Q5UIP0 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.62□□□□□ -0.07
RIF1Q5UIP0 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.62□□□□□ -0.07
RIF1Q5UIP0 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.62□□□□□ -0.07
RIF1Q5UIP0 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.62□□□□□ -0.07
RIF1Q5UIP0 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14.62□□□□□ -0.07
RIF1Q5UIP0 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.62□□□□□ -0.07
RIF1Q5UIP0 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
RIF1Q5UIP0 AC142086.5-202ENST00000562500 217 ntBASIC14.62□□□□□ -0.07
RIF1Q5UIP0 NAV1-210ENST00000593583 726 ntBASIC14.62□□□□□ -0.07
RIF1Q5UIP0 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
RIF1Q5UIP0 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
RIF1Q5UIP0 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RIF1Q5UIP0 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.62□□□□□ -0.07
RIF1Q5UIP0 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RIF1Q5UIP0 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RIF1Q5UIP0 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RIF1Q5UIP0 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.62□□□□□ -0.07
RIF1Q5UIP0 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RIF1Q5UIP0 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RIF1Q5UIP0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
RIF1Q5UIP0 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
RIF1Q5UIP0 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RIF1Q5UIP0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
RIF1Q5UIP0 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RIF1Q5UIP0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RIF1Q5UIP0 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RIF1Q5UIP0 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 RPSAP15-201ENST00000448168 861 ntBASIC14.61□□□□□ -0.07
RIF1Q5UIP0 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms