Protein–RNA interactions for Protein: Q53T59

HS1BP3, HCLS1-binding protein 3, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS1BP3Q53T59 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HS1BP3Q53T59 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HS1BP3Q53T59 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
HS1BP3Q53T59 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HS1BP3Q53T59 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC17.23■□□□□ 0.35
HS1BP3Q53T59 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.22■□□□□ 0.35
HS1BP3Q53T59 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC17.22■□□□□ 0.35
HS1BP3Q53T59 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HS1BP3Q53T59 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HS1BP3Q53T59 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
HS1BP3Q53T59 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HS1BP3Q53T59 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.22■□□□□ 0.35
HS1BP3Q53T59 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.22■□□□□ 0.35
HS1BP3Q53T59 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
HS1BP3Q53T59 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HS1BP3Q53T59 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.22■□□□□ 0.35
HS1BP3Q53T59 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HS1BP3Q53T59 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HS1BP3Q53T59 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HS1BP3Q53T59 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC17.22■□□□□ 0.35
HS1BP3Q53T59 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HS1BP3Q53T59 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.22■□□□□ 0.35
HS1BP3Q53T59 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.22■□□□□ 0.35
HS1BP3Q53T59 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HS1BP3Q53T59 RPSAP43-201ENST00000402237 625 ntBASIC17.22■□□□□ 0.35
HS1BP3Q53T59 AC004832.2-201ENST00000426397 482 ntBASIC17.22■□□□□ 0.35
HS1BP3Q53T59 AC009947.1-201ENST00000444350 727 ntBASIC17.22■□□□□ 0.35
HS1BP3Q53T59 AC108751.1-201ENST00000490852 363 ntBASIC17.22■□□□□ 0.35
HS1BP3Q53T59 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.22■□□□□ 0.35
HS1BP3Q53T59 AC004706.3-202ENST00000621574 984 ntBASIC17.22■□□□□ 0.35
HS1BP3Q53T59 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.22■□□□□ 0.35
HS1BP3Q53T59 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HS1BP3Q53T59 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HS1BP3Q53T59 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.22■□□□□ 0.35
HS1BP3Q53T59 AC073548.1-201ENST00000624088 1882 ntBASIC17.22■□□□□ 0.35
HS1BP3Q53T59 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HS1BP3Q53T59 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HS1BP3Q53T59 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HS1BP3Q53T59 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HS1BP3Q53T59 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
HS1BP3Q53T59 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HS1BP3Q53T59 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HS1BP3Q53T59 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC17.22■□□□□ 0.35
HS1BP3Q53T59 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.21■□□□□ 0.35
HS1BP3Q53T59 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
HS1BP3Q53T59 KRT8P22-201ENST00000562317 1415 ntBASIC17.21■□□□□ 0.35
HS1BP3Q53T59 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HS1BP3Q53T59 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HS1BP3Q53T59 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HS1BP3Q53T59 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HS1BP3Q53T59 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HS1BP3Q53T59 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HS1BP3Q53T59 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HS1BP3Q53T59 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HS1BP3Q53T59 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HS1BP3Q53T59 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC17.21■□□□□ 0.35
HS1BP3Q53T59 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HS1BP3Q53T59 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HS1BP3Q53T59 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HS1BP3Q53T59 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HS1BP3Q53T59 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.21■□□□□ 0.35
HS1BP3Q53T59 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HS1BP3Q53T59 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.21■□□□□ 0.35
HS1BP3Q53T59 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.21■□□□□ 0.35
HS1BP3Q53T59 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
HS1BP3Q53T59 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.21■□□□□ 0.35
HS1BP3Q53T59 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.21■□□□□ 0.35
HS1BP3Q53T59 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.21■□□□□ 0.35
HS1BP3Q53T59 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.21■□□□□ 0.35
HS1BP3Q53T59 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.21■□□□□ 0.35
HS1BP3Q53T59 AL031055.1-201ENST00000606362 631 ntBASIC17.21■□□□□ 0.35
HS1BP3Q53T59 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
HS1BP3Q53T59 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HS1BP3Q53T59 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HS1BP3Q53T59 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
HS1BP3Q53T59 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HS1BP3Q53T59 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HS1BP3Q53T59 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
HS1BP3Q53T59 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
HS1BP3Q53T59 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HS1BP3Q53T59 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.21■□□□□ 0.34
HS1BP3Q53T59 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
HS1BP3Q53T59 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
HS1BP3Q53T59 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
HS1BP3Q53T59 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HS1BP3Q53T59 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC17.2■□□□□ 0.34
HS1BP3Q53T59 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
HS1BP3Q53T59 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HS1BP3Q53T59 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
HS1BP3Q53T59 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
HS1BP3Q53T59 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
HS1BP3Q53T59 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HS1BP3Q53T59 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.2■□□□□ 0.34
HS1BP3Q53T59 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HS1BP3Q53T59 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
HS1BP3Q53T59 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.2■□□□□ 0.34
HS1BP3Q53T59 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HS1BP3Q53T59 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HS1BP3Q53T59 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HS1BP3Q53T59 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms