Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AREG-202ENST00000502307 956 ntTSL 5 BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 AL109837.1-201ENST00000603272 613 ntBASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 AC233280.19-201ENST00000633223 136 ntBASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 AL118508.1-201ENST00000613502 2345 ntBASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 BCAS2P2-201ENST00000425064 674 ntBASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 MIR3677-201ENST00000578964 60 ntBASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 FTLP5-201ENST00000586853 534 ntBASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RSPO4Q2I0M5 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 MRPL37P1-201ENST00000592451 1337 ntBASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 AC018695.7-201ENST00000624587 2492 ntBASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 ALOX12P2-203ENST00000570921 1945 ntBASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RSPO4Q2I0M5 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms