Protein–RNA interactions for Protein: Q07954

LRP1, Prolow-density lipoprotein receptor-related protein 1, humanhuman

Known RBP Predictions only

Length 4,544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1Q07954 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC8.81□□□□□ -1
LRP1Q07954 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
LRP1Q07954 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LRP1Q07954 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
LRP1Q07954 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC8.81□□□□□ -1
LRP1Q07954 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC8.81□□□□□ -1
LRP1Q07954 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC8.81□□□□□ -1
LRP1Q07954 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC8.81□□□□□ -1
LRP1Q07954 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC8.81□□□□□ -1
LRP1Q07954 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC8.81□□□□□ -1
LRP1Q07954 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC8.81□□□□□ -1
LRP1Q07954 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC8.81□□□□□ -1
LRP1Q07954 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC8.81□□□□□ -1
LRP1Q07954 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC8.81□□□□□ -1
LRP1Q07954 AL627230.2-201ENST00000613254 655 ntBASIC8.81□□□□□ -1
LRP1Q07954 AL451007.2-201ENST00000632004 563 ntBASIC8.81□□□□□ -1
LRP1Q07954 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LRP1Q07954 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LRP1Q07954 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LRP1Q07954 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LRP1Q07954 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC8.81□□□□□ -1
LRP1Q07954 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC8.81□□□□□ -1
LRP1Q07954 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC8.81□□□□□ -1
LRP1Q07954 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
LRP1Q07954 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LRP1Q07954 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
LRP1Q07954 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC8.81□□□□□ -1
LRP1Q07954 AC018629.1-201ENST00000623381 1736 ntBASIC8.81□□□□□ -1
LRP1Q07954 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC8.81□□□□□ -1
LRP1Q07954 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
LRP1Q07954 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC8.81□□□□□ -1
LRP1Q07954 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC8.81□□□□□ -1
LRP1Q07954 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC8.81□□□□□ -1
LRP1Q07954 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC8.81□□□□□ -1
LRP1Q07954 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC8.81□□□□□ -1
LRP1Q07954 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC8.81□□□□□ -1
LRP1Q07954 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC8.81□□□□□ -1
LRP1Q07954 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC8.81□□□□□ -1
LRP1Q07954 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC8.81□□□□□ -1
LRP1Q07954 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC8.81□□□□□ -1
LRP1Q07954 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC8.81□□□□□ -1
LRP1Q07954 FTLP5-201ENST00000586853 534 ntBASIC8.81□□□□□ -1
LRP1Q07954 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
LRP1Q07954 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC8.81□□□□□ -1
LRP1Q07954 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC8.8□□□□□ -1
LRP1Q07954 FAM90A2P-201ENST00000511144 1395 ntBASIC8.8□□□□□ -1
LRP1Q07954 FAM90A25P-201ENST00000528404 1395 ntBASIC8.8□□□□□ -1
LRP1Q07954 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
LRP1Q07954 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
LRP1Q07954 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LRP1Q07954 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LRP1Q07954 HLA-DQB1-202ENST00000399079 1501 ntBASIC8.8□□□□□ -1
LRP1Q07954 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC8.8□□□□□ -1
LRP1Q07954 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LRP1Q07954 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LRP1Q07954 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC8.8□□□□□ -1
LRP1Q07954 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC8.8□□□□□ -1
LRP1Q07954 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC8.8□□□□□ -1
LRP1Q07954 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC8.8□□□□□ -1
LRP1Q07954 PGAM1P12-201ENST00000505622 748 ntBASIC8.8□□□□□ -1
LRP1Q07954 CCNC-217ENST00000523985 958 ntTSL 2 BASIC8.8□□□□□ -1
LRP1Q07954 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC8.8□□□□□ -1
LRP1Q07954 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
LRP1Q07954 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC8.8□□□□□ -1
LRP1Q07954 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC8.8□□□□□ -1
LRP1Q07954 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC8.8□□□□□ -1
LRP1Q07954 AC133540.1-201ENST00000620845 1019 ntBASIC8.8□□□□□ -1
LRP1Q07954 AC138466.5-201ENST00000624002 808 ntBASIC8.8□□□□□ -1
LRP1Q07954 AC090502.4-201ENST00000551714 1386 ntBASIC8.8□□□□□ -1
LRP1Q07954 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LRP1Q07954 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
LRP1Q07954 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LRP1Q07954 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LRP1Q07954 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC8.8□□□□□ -1
LRP1Q07954 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC8.8□□□□□ -1
LRP1Q07954 LINC01815-202ENST00000641468 1409 ntBASIC8.8□□□□□ -1
LRP1Q07954 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
LRP1Q07954 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC8.8□□□□□ -1
LRP1Q07954 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LRP1Q07954 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
LRP1Q07954 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LRP1Q07954 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC8.8□□□□□ -1
LRP1Q07954 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LRP1Q07954 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LRP1Q07954 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
LRP1Q07954 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LRP1Q07954 AP000358.1-201ENST00000456260 156 ntBASIC8.8□□□□□ -1
LRP1Q07954 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC8.8□□□□□ -1
LRP1Q07954 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC8.8□□□□□ -1
LRP1Q07954 NUDT4P2-201ENST00000578341 546 ntBASIC8.8□□□□□ -1
LRP1Q07954 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC8.8□□□□□ -1
LRP1Q07954 AP001184.1-201ENST00000637936 376 ntBASIC8.8□□□□□ -1
LRP1Q07954 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
LRP1Q07954 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC8.8□□□□□ -1
LRP1Q07954 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC8.8□□□□□ -1
LRP1Q07954 AL596087.1-201ENST00000400979 1969 ntBASIC8.8□□□□□ -1
LRP1Q07954 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC8.8□□□□□ -1
LRP1Q07954 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
LRP1Q07954 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC8.8□□□□□ -1
LRP1Q07954 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms