Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AL121894.2-201ENST00000602977 491 ntBASIC13.79□□□□□ -0.2
SCN1BQ07699 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.79□□□□□ -0.2
SCN1BQ07699 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN1BQ07699 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN1BQ07699 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SCN1BQ07699 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN1BQ07699 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SCN1BQ07699 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SCN1BQ07699 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
SCN1BQ07699 AL031595.1-201ENST00000623969 4709 ntBASIC13.79□□□□□ -0.2
SCN1BQ07699 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN1BQ07699 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN1BQ07699 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN1BQ07699 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
SCN1BQ07699 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.79□□□□□ -0.2
SCN1BQ07699 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCN1BQ07699 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCN1BQ07699 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.78□□□□□ -0.2
SCN1BQ07699 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCN1BQ07699 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SCN1BQ07699 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
SCN1BQ07699 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.78□□□□□ -0.2
SCN1BQ07699 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCN1BQ07699 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SCN1BQ07699 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
SCN1BQ07699 AL356585.2-201ENST00000625078 2396 ntBASIC13.78□□□□□ -0.2
SCN1BQ07699 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SCN1BQ07699 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.78□□□□□ -0.2
SCN1BQ07699 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.78□□□□□ -0.2
SCN1BQ07699 KRT18P2-201ENST00000447938 1258 ntBASIC13.78□□□□□ -0.2
SCN1BQ07699 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.78□□□□□ -0.2
SCN1BQ07699 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.78□□□□□ -0.2
SCN1BQ07699 AC034105.1-201ENST00000563488 319 ntBASIC13.78□□□□□ -0.2
SCN1BQ07699 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCN1BQ07699 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCN1BQ07699 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCN1BQ07699 IL9RP2-201ENST00000423948 1312 ntBASIC13.78□□□□□ -0.2
SCN1BQ07699 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SCN1BQ07699 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCN1BQ07699 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCN1BQ07699 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SCN1BQ07699 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.78□□□□□ -0.2
SCN1BQ07699 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCN1BQ07699 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.78□□□□□ -0.2
SCN1BQ07699 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.78□□□□□ -0.2
SCN1BQ07699 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCN1BQ07699 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCN1BQ07699 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SCN1BQ07699 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SCN1BQ07699 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCN1BQ07699 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SCN1BQ07699 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCN1BQ07699 AC027612.1-201ENST00000445234 2395 ntBASIC13.78□□□□□ -0.2
SCN1BQ07699 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.78□□□□□ -0.2
SCN1BQ07699 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SCN1BQ07699 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
SCN1BQ07699 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
SCN1BQ07699 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SCN1BQ07699 AC099521.3-201ENST00000624251 2938 ntBASIC13.77□□□□□ -0.2
SCN1BQ07699 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
SCN1BQ07699 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SCN1BQ07699 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
SCN1BQ07699 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
SCN1BQ07699 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SCN1BQ07699 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
SCN1BQ07699 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCN1BQ07699 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCN1BQ07699 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
SCN1BQ07699 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCN1BQ07699 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCN1BQ07699 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCN1BQ07699 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCN1BQ07699 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCN1BQ07699 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCN1BQ07699 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCN1BQ07699 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.77□□□□□ -0.21
SCN1BQ07699 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCN1BQ07699 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCN1BQ07699 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SCN1BQ07699 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCN1BQ07699 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SCN1BQ07699 ZNF259P1-201ENST00000407656 1365 ntBASIC13.77□□□□□ -0.21
SCN1BQ07699 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.77□□□□□ -0.21
SCN1BQ07699 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.77□□□□□ -0.21
SCN1BQ07699 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.77□□□□□ -0.21
SCN1BQ07699 AC092474.2-201ENST00000424288 719 ntBASIC13.77□□□□□ -0.21
SCN1BQ07699 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.77□□□□□ -0.21
SCN1BQ07699 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.77□□□□□ -0.21
SCN1BQ07699 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SCN1BQ07699 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.77□□□□□ -0.21
SCN1BQ07699 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.77□□□□□ -0.21
SCN1BQ07699 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.77□□□□□ -0.21
SCN1BQ07699 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.77□□□□□ -0.21
SCN1BQ07699 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.77□□□□□ -0.21
SCN1BQ07699 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.77□□□□□ -0.21
SCN1BQ07699 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.77□□□□□ -0.21
SCN1BQ07699 AP001282.1-201ENST00000531301 1499 ntBASIC13.77□□□□□ -0.21
SCN1BQ07699 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.77□□□□□ -0.21
SCN1BQ07699 KRT19P2-202ENST00000557173 1012 ntBASIC13.77□□□□□ -0.21
SCN1BQ07699 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms