Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP1Q04837 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP1Q04837 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.01□□□□□ -0.33
SSBP1Q04837 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SSBP1Q04837 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
SSBP1Q04837 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SSBP1Q04837 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP1Q04837 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SSBP1Q04837 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP1Q04837 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SSBP1Q04837 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.01□□□□□ -0.33
SSBP1Q04837 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.01□□□□□ -0.33
SSBP1Q04837 KRT18P67-201ENST00000432816 1264 ntBASIC13.01□□□□□ -0.33
SSBP1Q04837 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC13.01□□□□□ -0.33
SSBP1Q04837 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.01□□□□□ -0.33
SSBP1Q04837 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP1Q04837 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.01□□□□□ -0.33
SSBP1Q04837 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.01□□□□□ -0.33
SSBP1Q04837 AC068137.2-201ENST00000605408 478 ntBASIC13.01□□□□□ -0.33
SSBP1Q04837 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.01□□□□□ -0.33
SSBP1Q04837 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP1Q04837 LILRP1-201ENST00000444199 1370 ntBASIC13.01□□□□□ -0.33
SSBP1Q04837 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.01□□□□□ -0.33
SSBP1Q04837 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.01□□□□□ -0.33
SSBP1Q04837 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
SSBP1Q04837 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SSBP1Q04837 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SSBP1Q04837 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.01□□□□□ -0.33
SSBP1Q04837 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
SSBP1Q04837 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP1Q04837 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.01□□□□□ -0.33
SSBP1Q04837 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SSBP1Q04837 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.01□□□□□ -0.33
SSBP1Q04837 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SSBP1Q04837 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13□□□□□ -0.33
SSBP1Q04837 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSBP1Q04837 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSBP1Q04837 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSBP1Q04837 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSBP1Q04837 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SSBP1Q04837 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13□□□□□ -0.33
SSBP1Q04837 AC089987.1-201ENST00000551654 2209 ntBASIC13□□□□□ -0.33
SSBP1Q04837 AC016397.2-201ENST00000624848 1985 ntBASIC13□□□□□ -0.33
SSBP1Q04837 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SSBP1Q04837 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSBP1Q04837 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
SSBP1Q04837 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13□□□□□ -0.33
SSBP1Q04837 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SSBP1Q04837 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13□□□□□ -0.33
SSBP1Q04837 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13□□□□□ -0.33
SSBP1Q04837 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SSBP1Q04837 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSBP1Q04837 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
SSBP1Q04837 TCAM1P-207ENST00000485295 1537 ntBASIC13□□□□□ -0.33
SSBP1Q04837 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSBP1Q04837 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
SSBP1Q04837 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13□□□□□ -0.33
SSBP1Q04837 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13□□□□□ -0.33
SSBP1Q04837 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SSBP1Q04837 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13□□□□□ -0.33
SSBP1Q04837 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13□□□□□ -0.33
SSBP1Q04837 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSBP1Q04837 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSBP1Q04837 AL133267.1-201ENST00000398220 340 ntBASIC13□□□□□ -0.33
SSBP1Q04837 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SSBP1Q04837 AC004945.1-201ENST00000416738 983 ntBASIC13□□□□□ -0.33
SSBP1Q04837 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13□□□□□ -0.33
SSBP1Q04837 NME4-207ENST00000450036 985 ntTSL 3 BASIC13□□□□□ -0.33
SSBP1Q04837 FAM197Y8-203ENST00000450145 560 ntBASIC13□□□□□ -0.33
SSBP1Q04837 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13□□□□□ -0.33
SSBP1Q04837 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13□□□□□ -0.33
SSBP1Q04837 AC112191.1-201ENST00000523689 701 ntBASIC13□□□□□ -0.33
SSBP1Q04837 TOLLIP-AS1-201ENST00000530897 939 ntBASIC13□□□□□ -0.33
SSBP1Q04837 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSBP1Q04837 BMF-207ENST00000559701 630 ntTSL 3 BASIC13□□□□□ -0.33
SSBP1Q04837 PRELID1P1-202ENST00000567272 903 ntBASIC13□□□□□ -0.33
SSBP1Q04837 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13□□□□□ -0.33
SSBP1Q04837 AC027307.2-201ENST00000591252 911 ntBASIC13□□□□□ -0.33
SSBP1Q04837 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13□□□□□ -0.33
SSBP1Q04837 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13□□□□□ -0.33
SSBP1Q04837 AC093458.2-201ENST00000623150 629 ntBASIC13□□□□□ -0.33
SSBP1Q04837 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13□□□□□ -0.33
SSBP1Q04837 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13□□□□□ -0.33
SSBP1Q04837 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SSBP1Q04837 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13□□□□□ -0.33
SSBP1Q04837 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
SSBP1Q04837 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
SSBP1Q04837 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13□□□□□ -0.33
SSBP1Q04837 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SSBP1Q04837 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSBP1Q04837 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SSBP1Q04837 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SSBP1Q04837 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13□□□□□ -0.33
SSBP1Q04837 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSBP1Q04837 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13□□□□□ -0.33
SSBP1Q04837 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
SSBP1Q04837 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SSBP1Q04837 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP1Q04837 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SSBP1Q04837 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms