Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 IGHV3-42-201ENST00000520410 361 ntBASIC15.16■□□□□ 0.02
CDKL1Q00532 TIMM17BP1-201ENST00000545713 516 ntBASIC15.16■□□□□ 0.02
CDKL1Q00532 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDKL1Q00532 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.16■□□□□ 0.02
CDKL1Q00532 AC004461.2-201ENST00000629517 803 ntBASIC15.16■□□□□ 0.02
CDKL1Q00532 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDKL1Q00532 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CDKL1Q00532 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CDKL1Q00532 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKL1Q00532 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKL1Q00532 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKL1Q00532 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKL1Q00532 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
CDKL1Q00532 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKL1Q00532 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDKL1Q00532 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CDKL1Q00532 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.16■□□□□ 0.02
CDKL1Q00532 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CDKL1Q00532 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.16■□□□□ 0.02
CDKL1Q00532 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.16■□□□□ 0.02
CDKL1Q00532 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.16■□□□□ 0.02
CDKL1Q00532 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKL1Q00532 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.16■□□□□ 0.02
CDKL1Q00532 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.16■□□□□ 0.02
CDKL1Q00532 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.16■□□□□ 0.02
CDKL1Q00532 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKL1Q00532 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDKL1Q00532 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKL1Q00532 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CDKL1Q00532 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CDKL1Q00532 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKL1Q00532 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.15■□□□□ 0.02
CDKL1Q00532 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKL1Q00532 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKL1Q00532 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CDKL1Q00532 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDKL1Q00532 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.15■□□□□ 0.02
CDKL1Q00532 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.15■□□□□ 0.02
CDKL1Q00532 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKL1Q00532 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKL1Q00532 AC104457.1-201ENST00000401024 814 ntBASIC15.15■□□□□ 0.02
CDKL1Q00532 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.15■□□□□ 0.02
CDKL1Q00532 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.15■□□□□ 0.02
CDKL1Q00532 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKL1Q00532 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.15■□□□□ 0.02
CDKL1Q00532 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.15■□□□□ 0.02
CDKL1Q00532 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.15■□□□□ 0.02
CDKL1Q00532 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKL1Q00532 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.15■□□□□ 0.02
CDKL1Q00532 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.15■□□□□ 0.02
CDKL1Q00532 AC009407.1-201ENST00000568958 598 ntBASIC15.15■□□□□ 0.02
CDKL1Q00532 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.15■□□□□ 0.02
CDKL1Q00532 AC011467.4-201ENST00000594891 528 ntBASIC15.15■□□□□ 0.02
CDKL1Q00532 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.15■□□□□ 0.02
CDKL1Q00532 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKL1Q00532 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.15■□□□□ 0.02
CDKL1Q00532 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKL1Q00532 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.15■□□□□ 0.02
CDKL1Q00532 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CDKL1Q00532 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKL1Q00532 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.15■□□□□ 0.02
CDKL1Q00532 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
CDKL1Q00532 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKL1Q00532 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.15■□□□□ 0.02
CDKL1Q00532 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.15■□□□□ 0.02
CDKL1Q00532 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CDKL1Q00532 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKL1Q00532 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKL1Q00532 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDKL1Q00532 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CDKL1Q00532 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
CDKL1Q00532 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKL1Q00532 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.14■□□□□ 0.01
CDKL1Q00532 AL137784.3-201ENST00000623858 2288 ntBASIC15.14■□□□□ 0.01
CDKL1Q00532 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.14■□□□□ 0.01
CDKL1Q00532 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKL1Q00532 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDKL1Q00532 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDKL1Q00532 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.14■□□□□ 0.01
CDKL1Q00532 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKL1Q00532 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDKL1Q00532 FGD5P1-202ENST00000614866 2498 ntBASIC15.14■□□□□ 0.01
CDKL1Q00532 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKL1Q00532 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDKL1Q00532 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKL1Q00532 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.14■□□□□ 0.01
CDKL1Q00532 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.14■□□□□ 0.01
CDKL1Q00532 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.14■□□□□ 0.01
CDKL1Q00532 AC004890.2-204ENST00000481968 304 ntBASIC15.14■□□□□ 0.01
CDKL1Q00532 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.14■□□□□ 0.01
CDKL1Q00532 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDKL1Q00532 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.14■□□□□ 0.01
CDKL1Q00532 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.14■□□□□ 0.01
CDKL1Q00532 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.14■□□□□ 0.01
CDKL1Q00532 AC025181.2-201ENST00000606994 802 ntBASIC15.14■□□□□ 0.01
CDKL1Q00532 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDKL1Q00532 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKL1Q00532 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.14■□□□□ 0.01
CDKL1Q00532 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CDKL1Q00532 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms