Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SKP1P63208 SAMD11P1-201ENST00000571429 661 ntBASIC14.61□□□□□ -0.07
SKP1P63208 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SKP1P63208 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
SKP1P63208 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.61□□□□□ -0.07
SKP1P63208 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SKP1P63208 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.61□□□□□ -0.07
SKP1P63208 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.61□□□□□ -0.07
SKP1P63208 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SKP1P63208 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.61□□□□□ -0.07
SKP1P63208 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SKP1P63208 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
SKP1P63208 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SKP1P63208 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SKP1P63208 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SKP1P63208 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.61□□□□□ -0.07
SKP1P63208 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SKP1P63208 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SKP1P63208 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SKP1P63208 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SKP1P63208 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
SKP1P63208 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SKP1P63208 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SKP1P63208 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SKP1P63208 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.6□□□□□ -0.07
SKP1P63208 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SKP1P63208 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SKP1P63208 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SKP1P63208 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SKP1P63208 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SKP1P63208 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SKP1P63208 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SKP1P63208 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SKP1P63208 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.6□□□□□ -0.07
SKP1P63208 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SKP1P63208 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.6□□□□□ -0.07
SKP1P63208 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SKP1P63208 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SKP1P63208 ACKR1-201ENST00000368121 1240 ntBASIC14.6□□□□□ -0.07
SKP1P63208 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SKP1P63208 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.6□□□□□ -0.07
SKP1P63208 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.6□□□□□ -0.07
SKP1P63208 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SKP1P63208 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.6□□□□□ -0.07
SKP1P63208 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.6□□□□□ -0.07
SKP1P63208 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
SKP1P63208 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.6□□□□□ -0.07
SKP1P63208 PTP4A1P2-201ENST00000546033 454 ntBASIC14.6□□□□□ -0.07
SKP1P63208 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.6□□□□□ -0.07
SKP1P63208 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.6□□□□□ -0.07
SKP1P63208 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.6□□□□□ -0.07
SKP1P63208 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.6□□□□□ -0.07
SKP1P63208 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.6□□□□□ -0.07
SKP1P63208 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SKP1P63208 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.6□□□□□ -0.07
SKP1P63208 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SKP1P63208 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SKP1P63208 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SKP1P63208 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.6□□□□□ -0.07
SKP1P63208 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.6□□□□□ -0.07
SKP1P63208 AC022532.1-201ENST00000624563 1728 ntBASIC14.6□□□□□ -0.07
SKP1P63208 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SKP1P63208 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SKP1P63208 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.6□□□□□ -0.07
SKP1P63208 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SKP1P63208 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SKP1P63208 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SKP1P63208 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
SKP1P63208 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
SKP1P63208 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SKP1P63208 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.59□□□□□ -0.07
SKP1P63208 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SKP1P63208 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SKP1P63208 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SKP1P63208 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SKP1P63208 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SKP1P63208 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.59□□□□□ -0.07
SKP1P63208 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SKP1P63208 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
SKP1P63208 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SKP1P63208 AC012508.2-201ENST00000567613 1472 ntBASIC14.59□□□□□ -0.07
SKP1P63208 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.59□□□□□ -0.07
SKP1P63208 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
SKP1P63208 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SKP1P63208 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.59□□□□□ -0.07
SKP1P63208 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SKP1P63208 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SKP1P63208 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
SKP1P63208 AC104457.1-201ENST00000401024 814 ntBASIC14.59□□□□□ -0.07
SKP1P63208 AL512384.1-201ENST00000406683 331 ntBASIC14.59□□□□□ -0.07
SKP1P63208 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SKP1P63208 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.59□□□□□ -0.07
SKP1P63208 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SKP1P63208 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.59□□□□□ -0.07
SKP1P63208 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.59□□□□□ -0.07
SKP1P63208 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.59□□□□□ -0.07
SKP1P63208 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.59□□□□□ -0.07
SKP1P63208 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SKP1P63208 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.59□□□□□ -0.07
SKP1P63208 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms