Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 AL645939.2-201ENST00000427340 991 ntBASIC12.04□□□□□ -0.48
ERVFC1-1P60608 THAP5-204ENST00000438865 868 ntTSL 2 BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 BX005266.1-201ENST00000473402 457 ntBASIC12.04□□□□□ -0.48
ERVFC1-1P60608 SLC25A6P2-201ENST00000497974 877 ntBASIC12.04□□□□□ -0.48
ERVFC1-1P60608 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.04□□□□□ -0.48
ERVFC1-1P60608 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 NUTM2HP-201ENST00000442076 2498 ntBASIC12.04□□□□□ -0.48
ERVFC1-1P60608 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ERVFC1-1P60608 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 NSUN5P1-202ENST00000421140 1535 ntBASIC12.03□□□□□ -0.48
ERVFC1-1P60608 NSUN5P2-203ENST00000457352 1529 ntBASIC12.03□□□□□ -0.48
ERVFC1-1P60608 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 CD99-202ENST00000381180 530 ntTSL 2 BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 BNIP3P18-201ENST00000593976 575 ntBASIC12.03□□□□□ -0.48
ERVFC1-1P60608 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 AC114341.1-201ENST00000618070 349 ntBASIC12.03□□□□□ -0.48
ERVFC1-1P60608 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
ERVFC1-1P60608 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms