Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VSX2P58304 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.73□□□□□ -0.05
VSX2P58304 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VSX2P58304 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.73□□□□□ -0.05
VSX2P58304 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
VSX2P58304 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.73□□□□□ -0.05
VSX2P58304 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.73□□□□□ -0.05
VSX2P58304 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.73□□□□□ -0.05
VSX2P58304 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.73□□□□□ -0.05
VSX2P58304 CLUHP6-201ENST00000580789 941 ntBASIC14.73□□□□□ -0.05
VSX2P58304 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
VSX2P58304 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.73□□□□□ -0.05
VSX2P58304 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.73□□□□□ -0.05
VSX2P58304 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
VSX2P58304 AC008735.3-201ENST00000596646 500 ntBASIC14.73□□□□□ -0.05
VSX2P58304 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.73□□□□□ -0.05
VSX2P58304 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.73□□□□□ -0.05
VSX2P58304 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
VSX2P58304 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VSX2P58304 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VSX2P58304 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.73□□□□□ -0.05
VSX2P58304 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VSX2P58304 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.73□□□□□ -0.05
VSX2P58304 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VSX2P58304 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VSX2P58304 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
VSX2P58304 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VSX2P58304 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.73□□□□□ -0.05
VSX2P58304 AC126755.1-201ENST00000525846 6405 ntBASIC14.73□□□□□ -0.05
VSX2P58304 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
VSX2P58304 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VSX2P58304 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
VSX2P58304 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VSX2P58304 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VSX2P58304 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VSX2P58304 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
VSX2P58304 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
VSX2P58304 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VSX2P58304 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VSX2P58304 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.72□□□□□ -0.05
VSX2P58304 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VSX2P58304 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VSX2P58304 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VSX2P58304 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.72□□□□□ -0.05
VSX2P58304 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
VSX2P58304 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VSX2P58304 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
VSX2P58304 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VSX2P58304 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
VSX2P58304 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.72□□□□□ -0.05
VSX2P58304 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.72□□□□□ -0.05
VSX2P58304 ACTG1P3-201ENST00000431775 1114 ntBASIC14.72□□□□□ -0.05
VSX2P58304 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.72□□□□□ -0.05
VSX2P58304 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.72□□□□□ -0.05
VSX2P58304 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.72□□□□□ -0.05
VSX2P58304 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.72□□□□□ -0.05
VSX2P58304 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
VSX2P58304 AP001063.1-201ENST00000568332 529 ntBASIC14.72□□□□□ -0.05
VSX2P58304 MIR5189-201ENST00000577370 114 ntBASIC14.72□□□□□ -0.05
VSX2P58304 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.72□□□□□ -0.05
VSX2P58304 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.72□□□□□ -0.05
VSX2P58304 AC015936.2-201ENST00000593177 259 ntBASIC14.72□□□□□ -0.05
VSX2P58304 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.72□□□□□ -0.05
VSX2P58304 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VSX2P58304 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
VSX2P58304 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VSX2P58304 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VSX2P58304 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VSX2P58304 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
VSX2P58304 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
VSX2P58304 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VSX2P58304 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.72□□□□□ -0.05
VSX2P58304 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VSX2P58304 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
VSX2P58304 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VSX2P58304 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VSX2P58304 SSR4P1-203ENST00000599569 2260 ntBASIC14.72□□□□□ -0.05
VSX2P58304 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.72□□□□□ -0.05
VSX2P58304 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VSX2P58304 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.72□□□□□ -0.05
VSX2P58304 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
VSX2P58304 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
VSX2P58304 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
VSX2P58304 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
VSX2P58304 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.71□□□□□ -0.05
VSX2P58304 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
VSX2P58304 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
VSX2P58304 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
VSX2P58304 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VSX2P58304 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VSX2P58304 CICP11-201ENST00000434745 2827 ntBASIC14.71□□□□□ -0.05
VSX2P58304 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VSX2P58304 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.71□□□□□ -0.05
VSX2P58304 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
VSX2P58304 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VSX2P58304 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
VSX2P58304 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.71□□□□□ -0.05
VSX2P58304 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
VSX2P58304 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VSX2P58304 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms