Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PMS1P54277 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PMS1P54277 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.89■□□□□ 0.29
PMS1P54277 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.89■□□□□ 0.29
PMS1P54277 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.89■□□□□ 0.29
PMS1P54277 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.89■□□□□ 0.29
PMS1P54277 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.89■□□□□ 0.29
PMS1P54277 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.89■□□□□ 0.29
PMS1P54277 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.89■□□□□ 0.29
PMS1P54277 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PMS1P54277 AC023310.3-201ENST00000557027 670 ntBASIC16.89■□□□□ 0.29
PMS1P54277 AC100756.1-201ENST00000562736 682 ntBASIC16.89■□□□□ 0.29
PMS1P54277 AC138749.3-201ENST00000567691 622 ntBASIC16.89■□□□□ 0.29
PMS1P54277 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PMS1P54277 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.89■□□□□ 0.29
PMS1P54277 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.89■□□□□ 0.29
PMS1P54277 AC116165.1-201ENST00000611806 668 ntBASIC16.89■□□□□ 0.29
PMS1P54277 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PMS1P54277 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PMS1P54277 AL360270.3-201ENST00000609118 1348 ntBASIC16.89■□□□□ 0.29
PMS1P54277 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.89■□□□□ 0.29
PMS1P54277 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PMS1P54277 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.89■□□□□ 0.29
PMS1P54277 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.89■□□□□ 0.29
PMS1P54277 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.89■□□□□ 0.29
PMS1P54277 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PMS1P54277 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PMS1P54277 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PMS1P54277 LILRP1-201ENST00000444199 1370 ntBASIC16.89■□□□□ 0.29
PMS1P54277 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PMS1P54277 AC018442.1-201ENST00000421439 2061 ntBASIC16.89■□□□□ 0.29
PMS1P54277 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PMS1P54277 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PMS1P54277 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PMS1P54277 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PMS1P54277 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PMS1P54277 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PMS1P54277 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PMS1P54277 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PMS1P54277 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PMS1P54277 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PMS1P54277 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.88■□□□□ 0.29
PMS1P54277 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PMS1P54277 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PMS1P54277 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PMS1P54277 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PMS1P54277 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PMS1P54277 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PMS1P54277 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PMS1P54277 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PMS1P54277 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.88■□□□□ 0.29
PMS1P54277 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PMS1P54277 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PMS1P54277 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.88■□□□□ 0.29
PMS1P54277 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.88■□□□□ 0.29
PMS1P54277 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
PMS1P54277 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.88■□□□□ 0.29
PMS1P54277 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
PMS1P54277 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.88■□□□□ 0.29
PMS1P54277 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PMS1P54277 AL662799.1-202ENST00000614205 422 ntBASIC16.88■□□□□ 0.29
PMS1P54277 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.88■□□□□ 0.29
PMS1P54277 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PMS1P54277 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PMS1P54277 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PMS1P54277 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PMS1P54277 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PMS1P54277 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.88■□□□□ 0.29
PMS1P54277 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PMS1P54277 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PMS1P54277 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.88■□□□□ 0.29
PMS1P54277 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PMS1P54277 AC005089.1-201ENST00000619486 2241 ntBASIC16.88■□□□□ 0.29
PMS1P54277 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.88■□□□□ 0.29
PMS1P54277 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PMS1P54277 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.87■□□□□ 0.29
PMS1P54277 DRD5P1-201ENST00000456605 1438 ntBASIC16.87■□□□□ 0.29
PMS1P54277 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PMS1P54277 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PMS1P54277 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
PMS1P54277 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
PMS1P54277 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PMS1P54277 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PMS1P54277 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
PMS1P54277 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PMS1P54277 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.87■□□□□ 0.29
PMS1P54277 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
PMS1P54277 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PMS1P54277 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PMS1P54277 AC007787.1-201ENST00000588095 1583 ntBASIC16.87■□□□□ 0.29
PMS1P54277 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PMS1P54277 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PMS1P54277 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PMS1P54277 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PMS1P54277 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PMS1P54277 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.87■□□□□ 0.29
PMS1P54277 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PMS1P54277 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.87■□□□□ 0.29
PMS1P54277 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PMS1P54277 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms