Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NUP98P52948 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NUP98P52948 PCDHGB8P-201ENST00000502926 1973 ntBASIC18.66■□□□□ 0.58
NUP98P52948 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.66■□□□□ 0.58
NUP98P52948 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NUP98P52948 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NUP98P52948 CAP2P1-201ENST00000557743 1390 ntBASIC18.66■□□□□ 0.58
NUP98P52948 WASH3P-207ENST00000560956 1394 ntBASIC18.66■□□□□ 0.58
NUP98P52948 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NUP98P52948 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NUP98P52948 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NUP98P52948 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.65■□□□□ 0.58
NUP98P52948 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NUP98P52948 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NUP98P52948 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NUP98P52948 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NUP98P52948 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NUP98P52948 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NUP98P52948 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
NUP98P52948 OR2R1P-201ENST00000441404 914 ntBASIC18.65■□□□□ 0.58
NUP98P52948 PAM16-211ENST00000575848 518 ntTSL 3 BASIC18.65■□□□□ 0.58
NUP98P52948 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NUP98P52948 CENPX-208ENST00000584347 799 ntTSL 2 BASIC18.65■□□□□ 0.58
NUP98P52948 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NUP98P52948 AC020922.3-201ENST00000595064 547 ntBASIC18.65■□□□□ 0.58
NUP98P52948 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.65■□□□□ 0.58
NUP98P52948 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NUP98P52948 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NUP98P52948 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC18.65■□□□□ 0.58
NUP98P52948 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NUP98P52948 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
NUP98P52948 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NUP98P52948 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NUP98P52948 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
NUP98P52948 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NUP98P52948 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NUP98P52948 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC18.65■□□□□ 0.58
NUP98P52948 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NUP98P52948 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC18.65■□□□□ 0.58
NUP98P52948 MIR4754-201ENST00000582477 89 ntBASIC18.65■□□□□ 0.58
NUP98P52948 MIR5572-201ENST00000583188 137 ntBASIC18.65■□□□□ 0.58
NUP98P52948 MIR6720-201ENST00000611664 98 ntBASIC18.65■□□□□ 0.58
NUP98P52948 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC18.65■□□□□ 0.58
NUP98P52948 DDX5-235ENST00000630471 473 ntTSL 4 BASIC18.65■□□□□ 0.58
NUP98P52948 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.65■□□□□ 0.58
NUP98P52948 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
NUP98P52948 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NUP98P52948 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NUP98P52948 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.64■□□□□ 0.58
NUP98P52948 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NUP98P52948 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
NUP98P52948 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUP98P52948 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUP98P52948 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUP98P52948 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NUP98P52948 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUP98P52948 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NUP98P52948 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUP98P52948 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.64■□□□□ 0.57
NUP98P52948 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NUP98P52948 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NUP98P52948 SKA2-202ENST00000437036 625 ntTSL 2 BASIC18.64■□□□□ 0.57
NUP98P52948 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC18.64■□□□□ 0.57
NUP98P52948 AC006335.1-201ENST00000445200 547 ntBASIC18.64■□□□□ 0.57
NUP98P52948 MIR3677-201ENST00000578964 60 ntBASIC18.64■□□□□ 0.57
NUP98P52948 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC18.64■□□□□ 0.57
NUP98P52948 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
NUP98P52948 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC18.64■□□□□ 0.57
NUP98P52948 AC012044.1-201ENST00000603431 297 ntBASIC18.64■□□□□ 0.57
NUP98P52948 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC18.64■□□□□ 0.57
NUP98P52948 SNX1-214ENST00000625244 324 ntTSL 5 BASIC18.64■□□□□ 0.57
NUP98P52948 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC18.64■□□□□ 0.57
NUP98P52948 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUP98P52948 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
NUP98P52948 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUP98P52948 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NUP98P52948 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
NUP98P52948 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.64■□□□□ 0.57
NUP98P52948 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NUP98P52948 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUP98P52948 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NUP98P52948 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NUP98P52948 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
NUP98P52948 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
NUP98P52948 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
NUP98P52948 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
NUP98P52948 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
NUP98P52948 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NUP98P52948 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC18.63■□□□□ 0.57
NUP98P52948 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC18.63■□□□□ 0.57
NUP98P52948 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC18.63■□□□□ 0.57
NUP98P52948 NDUFS6P1-201ENST00000485187 316 ntBASIC18.63■□□□□ 0.57
NUP98P52948 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
NUP98P52948 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
NUP98P52948 AC026803.1-201ENST00000569130 274 ntBASIC18.63■□□□□ 0.57
NUP98P52948 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NUP98P52948 NAP1L6-202ENST00000641404 1222 ntBASIC18.63■□□□□ 0.57
NUP98P52948 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NUP98P52948 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.63■□□□□ 0.57
NUP98P52948 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms