Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.55□□□□□ -0.08
CLK1P49759 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLK1P49759 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.55□□□□□ -0.08
CLK1P49759 AC011477.6-201ENST00000604980 1927 ntBASIC14.54□□□□□ -0.08
CLK1P49759 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.54□□□□□ -0.08
CLK1P49759 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CLK1P49759 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLK1P49759 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLK1P49759 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLK1P49759 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.54□□□□□ -0.08
CLK1P49759 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLK1P49759 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
CLK1P49759 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLK1P49759 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.54□□□□□ -0.08
CLK1P49759 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLK1P49759 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLK1P49759 C18orf15-201ENST00000623680 2534 ntBASIC14.54□□□□□ -0.08
CLK1P49759 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLK1P49759 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLK1P49759 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLK1P49759 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.54□□□□□ -0.08
CLK1P49759 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLK1P49759 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLK1P49759 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLK1P49759 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLK1P49759 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLK1P49759 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CLK1P49759 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.54□□□□□ -0.08
CLK1P49759 RPS8P6-201ENST00000426177 609 ntBASIC14.54□□□□□ -0.08
CLK1P49759 SPDYE14P-201ENST00000442619 822 ntBASIC14.54□□□□□ -0.08
CLK1P49759 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.54□□□□□ -0.08
CLK1P49759 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLK1P49759 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.54□□□□□ -0.08
CLK1P49759 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.54□□□□□ -0.08
CLK1P49759 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLK1P49759 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.54□□□□□ -0.08
CLK1P49759 AC007967.4-201ENST00000614700 386 ntBASIC14.54□□□□□ -0.08
CLK1P49759 AC139530.3-201ENST00000620344 690 ntBASIC14.54□□□□□ -0.08
CLK1P49759 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.54□□□□□ -0.08
CLK1P49759 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.54□□□□□ -0.08
CLK1P49759 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLK1P49759 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CLK1P49759 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLK1P49759 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLK1P49759 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLK1P49759 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLK1P49759 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLK1P49759 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLK1P49759 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLK1P49759 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
CLK1P49759 AC105250.1-201ENST00000509378 2057 ntBASIC14.54□□□□□ -0.08
CLK1P49759 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CLK1P49759 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CLK1P49759 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.54□□□□□ -0.08
CLK1P49759 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLK1P49759 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLK1P49759 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CLK1P49759 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLK1P49759 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLK1P49759 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLK1P49759 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLK1P49759 AC079781.5-202ENST00000641784 3743 ntBASIC14.54□□□□□ -0.08
CLK1P49759 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLK1P49759 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLK1P49759 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLK1P49759 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLK1P49759 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLK1P49759 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14.53□□□□□ -0.08
CLK1P49759 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLK1P49759 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CLK1P49759 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.53□□□□□ -0.08
CLK1P49759 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLK1P49759 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CLK1P49759 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.53□□□□□ -0.08
CLK1P49759 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CLK1P49759 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLK1P49759 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.53□□□□□ -0.08
CLK1P49759 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLK1P49759 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CLK1P49759 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
CLK1P49759 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
CLK1P49759 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLK1P49759 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.53□□□□□ -0.08
CLK1P49759 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLK1P49759 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLK1P49759 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLK1P49759 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CLK1P49759 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLK1P49759 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.53□□□□□ -0.08
CLK1P49759 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.53□□□□□ -0.08
CLK1P49759 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.53□□□□□ -0.08
CLK1P49759 AC025678.2-201ENST00000562061 970 ntBASIC14.53□□□□□ -0.08
CLK1P49759 AC027612.4-201ENST00000605371 583 ntBASIC14.53□□□□□ -0.08
CLK1P49759 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.53□□□□□ -0.08
CLK1P49759 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CLK1P49759 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.53□□□□□ -0.08
CLK1P49759 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.53□□□□□ -0.08
CLK1P49759 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CLK1P49759 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CLK1P49759 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 274.1 ms