Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 AC005562.1-201ENST00000583030 3219 ntBASIC13.33□□□□□ -0.28
CBX5P45973 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CBX5P45973 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CBX5P45973 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.33□□□□□ -0.28
CBX5P45973 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CBX5P45973 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CBX5P45973 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC13.33□□□□□ -0.28
CBX5P45973 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CBX5P45973 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC13.33□□□□□ -0.28
CBX5P45973 RPS8P6-201ENST00000426177 609 ntBASIC13.33□□□□□ -0.28
CBX5P45973 FAM197Y8-203ENST00000450145 560 ntBASIC13.33□□□□□ -0.28
CBX5P45973 PHKG1P2-201ENST00000457537 863 ntBASIC13.33□□□□□ -0.28
CBX5P45973 RNF146-204ENST00000476956 884 ntTSL 2 BASIC13.33□□□□□ -0.28
CBX5P45973 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC13.33□□□□□ -0.28
CBX5P45973 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.33□□□□□ -0.28
CBX5P45973 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CBX5P45973 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CBX5P45973 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.33□□□□□ -0.28
CBX5P45973 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CBX5P45973 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.33□□□□□ -0.28
CBX5P45973 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.33□□□□□ -0.28
CBX5P45973 AC073389.1-201ENST00000595595 795 ntBASIC13.33□□□□□ -0.28
CBX5P45973 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.33□□□□□ -0.28
CBX5P45973 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CBX5P45973 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.33□□□□□ -0.28
CBX5P45973 SPTSSB-204ENST00000617024 1292 ntBASIC13.33□□□□□ -0.28
CBX5P45973 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.33□□□□□ -0.28
CBX5P45973 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
CBX5P45973 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CBX5P45973 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CBX5P45973 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CBX5P45973 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CBX5P45973 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CBX5P45973 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.33□□□□□ -0.28
CBX5P45973 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC13.33□□□□□ -0.28
CBX5P45973 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CBX5P45973 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.28
CBX5P45973 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CBX5P45973 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CBX5P45973 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CBX5P45973 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CBX5P45973 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CBX5P45973 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CBX5P45973 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CBX5P45973 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
CBX5P45973 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CBX5P45973 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CBX5P45973 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CBX5P45973 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CBX5P45973 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CBX5P45973 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CBX5P45973 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CBX5P45973 AC005912.2-201ENST00000619492 2400 ntBASIC13.32□□□□□ -0.28
CBX5P45973 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CBX5P45973 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CBX5P45973 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CBX5P45973 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC13.32□□□□□ -0.28
CBX5P45973 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CBX5P45973 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CBX5P45973 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CBX5P45973 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CBX5P45973 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CBX5P45973 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CBX5P45973 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CBX5P45973 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CBX5P45973 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CBX5P45973 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.32□□□□□ -0.28
CBX5P45973 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CBX5P45973 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.32□□□□□ -0.28
CBX5P45973 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CBX5P45973 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.32□□□□□ -0.28
CBX5P45973 IGLL3P-201ENST00000412472 434 ntBASIC13.32□□□□□ -0.28
CBX5P45973 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CBX5P45973 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.32□□□□□ -0.28
CBX5P45973 KRT18P67-201ENST00000432816 1264 ntBASIC13.32□□□□□ -0.28
CBX5P45973 HNRNPDP1-201ENST00000439535 754 ntBASIC13.32□□□□□ -0.28
CBX5P45973 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13.32□□□□□ -0.28
CBX5P45973 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.32□□□□□ -0.28
CBX5P45973 UNC93B6-202ENST00000528242 690 ntBASIC13.32□□□□□ -0.28
CBX5P45973 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CBX5P45973 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CBX5P45973 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CBX5P45973 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.32□□□□□ -0.28
CBX5P45973 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CBX5P45973 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CBX5P45973 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CBX5P45973 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CBX5P45973 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CBX5P45973 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CBX5P45973 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CBX5P45973 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.32□□□□□ -0.28
CBX5P45973 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CBX5P45973 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CBX5P45973 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CBX5P45973 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CBX5P45973 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CBX5P45973 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CBX5P45973 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CBX5P45973 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CBX5P45973 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms